Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  232 bits (591), Expect = 5e-65
 Identities = 189/661 (28%), Positives = 320/661 (48%), Gaps = 27/661 (4%)

Query: 1   MGLSIVQRIIAGFVLMLLLLILLGVISTLKIRGINDGLSEVSDRATPLVMAVAGLKEALQ 60
           M L+I+ +I  GF L   LL+L  ++S   + GI D   +V ++  P+  ++  +K  + 
Sbjct: 1   MQLTIINKITLGFGLFGCLLLLTSILSYFGLSGIKDSAQDVVEQKMPVQTSMVKVKTEIL 60

Query: 61  ESNRWVLEFRTSEEAGELPQLSNKFKDQQARFRQLSQQMNALTDSTESQKQFQDVLQATN 120
             +         E   EL      F    + F     ++N+L  +        DV  A  
Sbjct: 61  SLSVITANGYHVENREELVANKETFDTLSSAFSDDLSRLNSLMSNNAVASNAVDVSLA-- 118

Query: 121 QFYSQADQVLTQHSEWVNALAQRRKLEIAFIRLEDTYQWAADLLLQQSSGQRSMRNKAEL 180
            + + ++ + T  +E +N     + L     ++  T   A+ L+L  S  + +  +   L
Sbjct: 119 -YVNSSNDMYTAINERMNI---EKALAAQLEKVLMTADEASALMLDLSYLEGNNPSIETL 174

Query: 181 ITSGIARDLKNIRRADAKTDLNELEKVLSKD--IEMARKRLDRVLVPDDVKARY------ 232
           I +G A D K +   ++  +L E +        IE    +L  + V  D   R       
Sbjct: 175 IGAGTAIDNKLLTMNNSFIELAETDNATQSASIIEDLEYQLSNLQVDKDYVNRLATGVDD 234

Query: 233 ---IANLNR----LQELALGQNGLLATMR-KAQQLENALLIQNQQVDASLASSLAKLDDM 284
              IA+ N     L E   G NGL+A  R K  +++ A   Q +  +A L ++LA ++ +
Sbjct: 235 GGTIASFNEQYDLLMEAVNGTNGLIALQRQKLSEVDKAAKAQKEAKEA-LETALADINTL 293

Query: 285 --AKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHE 342
             A    S+  Q+ +L     +     I+A   + AA+ L +  T  RSI KPL +IN  
Sbjct: 294 FDAVQKQSLDGQNAILESVQANLVRNIIVAALGLVAAIFLAVIVT--RSISKPLGRINKG 351

Query: 343 LAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEIS 402
           L+ +++GD++ ++      EF ALS  ++ L D   EL+  I    + L++    S E+ 
Sbjct: 352 LSQLSKGDLSTKLPQEGNDEFSALSAKVNSLTDSLRELVGNILEQEKRLIDITKESVELG 411

Query: 403 ERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTR 462
            ++++ V +Q+ Q    +     ++  +       + A D +     ++    Q V  + 
Sbjct: 412 NKSLSEVDKQREQVTVTSTNTKHVQEKSRSNLAQINEAMDALRDITKQSTDIGQLVQKSS 471

Query: 463 RITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGR 522
           +     A   ES+  I ++L + S NIGSILDVI+ IAEQTNLLALNAAIEAARAG+ GR
Sbjct: 472 QQVGNQAKQAESSAQIINRLDDNSRNIGSILDVIKTIAEQTNLLALNAAIEAARAGEQGR 531

Query: 523 GFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDS 582
           GFAVVADEVR LA RT  STEEI+ MI NLQ+ + Q V+ +   +EQ +  VE T+++  
Sbjct: 532 GFAVVADEVRTLANRTHDSTEEIEQMIGNLQKDAAQAVKAINAGREQAQEGVEITQQVSQ 591

Query: 583 ALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEV 642
            ++SI + +  + ++ + +    ++Q V+   VA  +  I  +A  + +  R+S  S+ +
Sbjct: 592 QVESIREIIERLSDINEHIVADTEQQDVLLGDVAKSLNRIVALADSSAQSTRQSNESTML 651

Query: 643 L 643
           L
Sbjct: 652 L 652