Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  307 bits (787), Expect = 9e-88
 Identities = 211/683 (30%), Positives = 349/683 (51%), Gaps = 33/683 (4%)

Query: 1   MGLSIVQRIIAGFVLMLLLLILLGVISTLKIRGINDGLSEVSDRATPLVMAVAGLKEALQ 60
           M +++  R+I GFV +  LLI++ V+S   +  I     EV+D A P V     LK +  
Sbjct: 1   MKITVATRVIGGFVAISALLIVISVVSLYNLNSIGSATEEVNDVALPTVAGSNALKASFL 60

Query: 61  ESNRWVLEFRTSEEAGELPQLSNKFKDQQARFRQLSQQM-NALTDSTESQKQFQDVLQAT 119
              R   E    E+   L      F   +  F    +++  A+ +  E +     V ++ 
Sbjct: 61  NMGRLTFESYIEEDLNGLKDKRASFNSAKDTFESEYKKLAQAVNNEPELKSTLNTVRESY 120

Query: 120 NQFYSQADQVLTQHSEWVNALAQRRKLEIAFIRLEDTYQWAADLLLQQSSGQRSMRN--- 176
             + +  + +   H  +++    R  ++      ED    A+  LL  S      R+   
Sbjct: 121 EAYITNVEAMYKNHQMYLDI---RNTIQDRLGDAEDNADDASTYLLDFSDLDAVQRDPNL 177

Query: 177 -KAELITSGIARDLKNIRRAD-----------AKTDLNELEKVLSKDIEMARKRLDRVLV 224
            +A  I S +   L ++               ++T  NE++ V+ K +      +     
Sbjct: 178 RRAAEIGSQLETSLLSLLTVSYEYIKTETLVRSQTLGNEVDLVVEKVVTQLSDMMQTAGG 237

Query: 225 PDDVKARYIANLNRLQELALG----QNGLLAT----MRKAQQLENALLIQNQQVDASLAS 276
            DD  +  + ++N L   A+      +G++      + +    E AL       D+++A 
Sbjct: 238 RDD--SGTLDDINDLVNNAINAIKANDGVVQLHVDRLERRNDAEKAL----NASDSNIAQ 291

Query: 277 SLAKLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPL 336
           ++  L+++   A   A       + A+++ N +++ V  IS AVA  IGY T R+I +PL
Sbjct: 292 AVVALENLLNLADKKASHVESQVNGAIATGNTFVIVVVIISIAVAAFIGYVTVRAITRPL 351

Query: 337 QKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEAS 396
            ++N  L   + GD+T R++   + EFG L+R+ + L     EL++ IN  +  L   + 
Sbjct: 352 YRVNELLTVASSGDLTHRLDDSAQDEFGLLARNCNTLIGNLKELITAINVRAEQLAAASE 411

Query: 397 RSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQ 456
           +++ ++ +    +Q+QKSQ  QVA A TE+  ++  V ++ +    ++  ADAEA+  RQ
Sbjct: 412 QTSAVTAQTTHSIQDQKSQIGQVATATTEMHSTSQLVVQNAEDTLSQIRHADAEAENVRQ 471

Query: 457 KVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAAR 516
                +   E L+ D++ A  + +KL + S +IG ILDVIRG+A+QTNLLALNAAIEAAR
Sbjct: 472 ISLENKNTIEILSRDVQEAADVINKLHQDSASIGGILDVIRGVADQTNLLALNAAIEAAR 531

Query: 517 AGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQ 576
           AG+ GRGFAVVADEVR LA+RTQ ST+EI  MIE LQ  +++ V VM + +EQT ACV Q
Sbjct: 532 AGEQGRGFAVVADEVRTLASRTQESTQEINAMIEVLQAGAEKAVSVMNQGKEQTAACVAQ 591

Query: 577 TREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARES 636
           T +   AL  I+D +    +++ Q+  +A+EQ  VSQ ++  +  I  +A ET   A+++
Sbjct: 592 TEKATQALDIISDAVHKAHDVSSQIEQSAREQNTVSQEISEKLETIVGIAEETTAGAQQT 651

Query: 637 ASSSEVLADLAAKQQQLIAHFKV 659
           + SS  +A LA + QQ I  FKV
Sbjct: 652 SESSHEVARLAEELQQSIRQFKV 674