Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  195 bits (495), Expect = 6e-54
 Identities = 125/361 (34%), Positives = 188/361 (52%), Gaps = 2/361 (0%)

Query: 301 AAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG--DMTRRINYP 358
           A++++ +  I+  + + A    +IG   A ++ KPL+ +      + RG  D+  RI  P
Sbjct: 276 ASLNAGSRQIIIWALVIAGAFALIGIWLAGTLTKPLESLADVFQQLGRGQGDLRSRIPMP 335

Query: 359 TRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQ 418
            + E   L    +   D     +SQ+   S  L   A   A+ S +     + Q+ QT Q
Sbjct: 336 EQKEIARLVEGFNNFIDHLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRDQTLQ 395

Query: 419 VAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGI 478
            AAA+TE+  +  EVA+S   A    + A   +  GR+           L+  ++    +
Sbjct: 396 AAAALTEMGSTVNEVAQSATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQDVSRV 455

Query: 479 THKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRT 538
              L E +  IG ILD IRGI+EQTNLLALNAAIEAARAGD GRGF+VVADEVR LA R 
Sbjct: 456 IQSLDEHTAAIGGILDTIRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTLAQRA 515

Query: 539 QTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMA 598
             +T+EIQ  I+  Q+ SK  V  M  S+ +T   V  T E+D  LQ IA+ +  I ++ 
Sbjct: 516 AQATDEIQVKIDKFQQDSKSAVSQMESSRARTTDVVTATNEIDKLLQDIAEEIAHINDVN 575

Query: 599 DQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFK 658
            QVA A +EQ  V + ++ ++  I+  + ET    +   S S+ L +LA +    ++ FK
Sbjct: 576 TQVATATEEQATVVEDISRNINDISASSEETLNATKILVSVSDKLDELAQELSSEVSRFK 635

Query: 659 V 659
           +
Sbjct: 636 L 636