Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 19/241 (7%)

Query: 32  KALWEQKIIPAFEAANPGIKVKFNPVPNVNYTPTLWENLKAGKAGDLITCRPFDDSLALF 91
           K  W    +  FEAAN    VK + +P  +        ++ G+A D+    P  D     
Sbjct: 55  KKEWVTARVKEFEAANKQCTVKLSFIPKADIYTQAKSAVRTGQAPDIFYMEP--DQPEFL 112

Query: 92  KAGHLAEITEMAGMENFPSFAQAPWQTDSGAQTFCVPMASVIHGFFYNKKIFNELGLSVP 151
             G L  +     +     +A+  W   S  + + VP+ +     +YNK +  ++G+ VP
Sbjct: 113 AGGFLEPLDGYIDLNGLEDWAKPAW--TSKGKVYGVPVEAYTVELYYNKDLVKKVGVDVP 170

Query: 152 Q----TREQFFTVLDKVKADGRYIPLSMS-GSESWVASELGYQNIGPNYWKGEDGRLALI 206
                T+ QF  ++ K  A G   P+S   G   +   +L ++++      G D    L+
Sbjct: 171 ASFQLTQAQFTDLVKKGVAAG-ITPVSQGVGDRPFPGGQLLFESLLRKL--GPDDYSKLL 227

Query: 207 NGQEHLDDSQYVKVFEELARWRAYLGEDGELRDYGTSNELFTSGKAALYVAGSWEIAPFT 266
           NG+    D +     +E+  W   L + G    Y  S      G++  Y   S     F 
Sbjct: 228 NGELSFKDPR----VQEVMTWVKELVDAGA---YPKSFSTLKLGESHFYFYNSPGSLTFP 280

Query: 267 D 267
           D
Sbjct: 281 D 281