Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., glucose/xylose ABC transporter, periplasmic substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 5/136 (3%)

Query: 133 IHGFFYNKKIFNELGLSV-PQTREQFFTVLDKVKADGRYIPLSMSGSESWVASELGYQNI 191
           ++  + N ++F + G++  P T ++F+   DK+KA G +IPL+  G + W  S + ++ +
Sbjct: 147 VNWLWINPEVFKKAGITKNPTTLQEFYAAGDKLKAAG-FIPLA-HGGQPWQDSTV-FEAV 203

Query: 192 GPNYWKGEDGRLALIN-GQEHLDDSQYVKVFEELARWRAYLGEDGELRDYGTSNELFTSG 250
             +    +  + AL++     L   + VK   EL +   Y+  DG+ +D+        +G
Sbjct: 204 VLSVMGADGYKKALVDLDNGALTGPEMVKALTELKKVATYMDVDGKGQDWNLEAGKVING 263

Query: 251 KAALYVAGSWEIAPFT 266
           KA + + G W  + +T
Sbjct: 264 KAGMQIMGDWAKSEWT 279