Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., extracellular solute-binding protein from Dickeya dianthicola ME23

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 58/279 (20%), Positives = 106/279 (37%), Gaps = 22/279 (7%)

Query: 135 GFFYNKKIFNELGLSVPQTREQFFTVLDKVKADGRYIPLSMSG-----SESWVASELGYQ 189
           G +YNK + ++ G++VPQT  +    +  +KA G  IP  M G         + S L   
Sbjct: 159 GLYYNKALLDKAGIAVPQTLPELEKAMATLKAKG--IPPLMLGLLDGNMGQQLLSTLWET 216

Query: 190 NIGPNYWKGEDGRLALINGQEHLDDSQYVKVFEELARW--RAYLGEDGELRDYGTSNELF 247
           +I     K  D  +  + G    +D + +K    +  W  + Y     +   +  +  LF
Sbjct: 217 HIDSANRKPLDALIYGVGGT--FNDPRLLKAAGIMQDWNQKGYFFPGFQGIGHDDAATLF 274

Query: 248 TSGKAALYVAGSWEIAPFTDKVDFGVMRPPVAKQGDGCFFTDHTDIGMGMNPASKNPQA- 306
            +G++A  ++G+W +  F    D      P A+  +       TD+   +   +K  +  
Sbjct: 275 QNGQSAFLISGTWYLGQFKQNKDIHFATIPHAEGVNHALMVGGTDLAYSITNMAKTKEQR 334

Query: 307 --AMAFLQWLTTPEFAELYTNSLPGFFSL---SNHFFDVTNPAAREMME-WRDQCDSTIR 360
             A  F+ ++ +   A L+  +  GF       N      NP   E    W D   +   
Sbjct: 335 DDAAKFIDYIVSDSMANLWLQA--GFLPAGTDKNAAIPKDNPLLEEAYHTWVDL--NAYD 390

Query: 361 VATQILSRGQPKLGDELAEVSQAVLVGKMTPTAAAERLE 399
                +    P +   L +  Q +L  ++TP      L+
Sbjct: 391 GLGHYVDWATPTMNTTLNQNVQLLLANRLTPAQLVANLD 429