Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

 Score = 64.3 bits (155), Expect = 7e-15
 Identities = 73/322 (22%), Positives = 121/322 (37%), Gaps = 46/322 (14%)

Query: 26  SWRADDKAL--WEQKIIPAFEAANPGIKVKFNPVPNVNYTPTLWENLKAGKAGDLITCRP 83
           SW+ DD     W +  I AFE  +PG+K++F      +Y  T+     A +   ++    
Sbjct: 36  SWQTDDAGTGEWWRSAIAAFEKQHPGVKIEFTKAERSSYADTMTTLFAANQPPQIVHLAS 95

Query: 84  FDDSLALFKAGHLAEITEMAGMENFPSFAQAPWQ-TDSGAQTFCVPMASVIHGFFYNKKI 142
           F+  +    +G L  +      +       A  Q  +   +T C+          YNKK+
Sbjct: 96  FEFQM-FADSGWLEPLDPWLKKDGIDMTGWAGQQKCEWNGETVCIMTNYFGFVMAYNKKL 154

Query: 143 FNELGLSVPQTREQFFTVLDKVKADGRYIPL---------SMSGSESWVASELGYQNIGP 193
             + G++VP+T ++F         D     +         +  G   ++   L Y     
Sbjct: 155 LEDAGVAVPKTYDEFLAAAKATTKDLNGDGIIDQFGTGHETKGGPGQYLTEMLNYILDAG 214

Query: 194 NYWKGEDGRLALINGQEHLDDSQYVKVFEELARWRAYLGEDGELRDYGTSN--ELFTSGK 251
            YW  +DG +        +D  Q V   E L+RW+  +       D   S+  +LF  GK
Sbjct: 215 AYWTDKDGNIT-------IDTPQMV---EGLSRWKTVMKSGISPVDMSASDVRKLFADGK 264

Query: 252 AALYVAGSW---EIAPFTDKVDFGVMRPPVAKQGDGCFFTDHTDIGMGMN----PAS-KN 303
            A+ + G W        + K D   + PP+           H  +G   N    PA   +
Sbjct: 265 MAMRLDGPWLYGTTEKGSAKSDIVYVAPPL-----------HPPLGGSSNVLAMPADIPD 313

Query: 304 PQAAMA--FLQWLTTPEFAELY 323
            Q A+   F++   TPEF   Y
Sbjct: 314 DQKALVWDFIKLTMTPEFQRSY 335