Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 74/329 (22%), Positives = 135/329 (41%), Gaps = 33/329 (10%)

Query: 19  ASELVIESWRA--DDKALWEQKIIPAFEAANPGIKVKFNPVPNVNYTPTLWENLKAGKAG 76
           A  + IE W+   D +     ++I  F+ ANP I VK    P  +Y   +     +GK  
Sbjct: 26  AQAVEIEYWQYVFDTRVKAMDELIAEFQKANPDITVKQVTFPYADYQTRVIAANLSGKGP 85

Query: 77  DLITCRPFDDSLALFKAGHLAEITEMAGMENFP------SFAQAPWQTDSGAQTFCVPMA 130
           D++    F   L  F AG    I +    + FP       F         G   + +P A
Sbjct: 86  DVMQL--FYGWLDKFAAGG---ILQPLPKDAFPHDKIESEFFPIVSAMKRGDDYYGLPTA 140

Query: 131 SVIHGFFYNKKIFNELGLSV---PQTREQFFTVLDKVKADGRYIPLSMSGSESWVASELG 187
                 FYNKK+F E GL     P+T ++F    +K+        L+++GS      ++G
Sbjct: 141 VRSLALFYNKKLFTEAGLDAANPPKTLDEFVAAAEKIAKHDAAGNLTVAGS----TLDMG 196

Query: 188 YQNIGPNYWKGEDGRLALINGQEHLDDSQYVKVFEE----LARWRAYLGEDGELRDYGTS 243
            Q+    +W+  +  +    G+ + D+ Q V    E      ++   L  + ++   G  
Sbjct: 197 GQD--HQWWR--EVLIRQYGGEPYADNDQKVTYNSEPGIQALKFYTSLQLEKKIGQVGFM 252

Query: 244 NE---LFTSGKAALYVAGSWEIAPFTDKVDF--GVMRPPVAKQGDGCFFTDHTDIGMGMN 298
           +E    F +GKA + + G++ +  F    DF  GV   P   +     +  +   G+   
Sbjct: 253 DEGQAAFRAGKAGMTIDGTFRLGSFRTIKDFEWGVTELPTNDKNIRSNYASYFANGISAK 312

Query: 299 PASKNPQAAMAFLQWLTTPEFAELYTNSL 327
              +  +A+  FL ++++PE   ++  ++
Sbjct: 313 TTGEELEASKKFLAYISSPEAMAIWLKTV 341