Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., ABC transporter, substrate binding protein (sn-glycerol 3-phosphate) from Agrobacterium fabrum C58

 Score = 47.8 bits (112), Expect = 7e-10
 Identities = 61/295 (20%), Positives = 123/295 (41%), Gaps = 34/295 (11%)

Query: 127 VPMASVIHGFFYNKKIFNELGLSVPQTREQFFTVLDKVKADGRYIPLSMSGSESWVASEL 186
           +P  S     + N +   + G+  P+T E+F  V  K+K  G YIPL  S   +W  +E 
Sbjct: 137 MPFNSSAPIMYINDEALKKAGVEAPKTWEEFEKVAPKLKEAG-YIPLVQS-QLTWQFTEN 194

Query: 187 GYQNIGPNYWKGEDGRLALINGQEHLDDSQYVKVFEELARWR-----AYLGEDGELRDYG 241
            +      +    +G  ++ + +  + D   V +FE+L  W+     AY G       + 
Sbjct: 195 FFSRNNIQFATNNNGYDSVTDTKLKVTDPNLVMMFEKLKDWKDKGLFAYYG-----AGWN 249

Query: 242 TSNELFTSGKAALYV--AGSWEIAPFTDKVDFGVMRPP----VAKQGDGCFFTDHTDIGM 295
            + + F  GK AL++  +GS+     T  + F     P    +   G   F        M
Sbjct: 250 DNQKPFEEGKVALWIGSSGSFGGLQKTATMPFSATFLPYWGSIKGAGTNSFIGGAALFAM 309

Query: 296 GMNPASKNPQAAMAFLQWLTTPEFAELYTNSLPGFFSLSNHFFDVTNPAAREMMEWRDQC 355
                ++N +    F Q+LT+PE  +++ +   G+ +++   ++     A+    ++++ 
Sbjct: 310 SGKSEAEN-KCVADFFQFLTSPEI-QVFYHKATGYVAITKAAYE----KAKTEGYYKEKP 363

Query: 356 DSTIRVATQILSRGQ----------PKLGDELAEVSQAVLVGKMTPTAAAERLEQ 400
            + + +    L  G+          P++   +      +  G++TP AA E +E+
Sbjct: 364 VAEVGIQQLSLPGGEWSKGYRLGFYPQIRAVMEREYNRIFSGEVTPKAAFEIIEK 418