Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  224 bits (572), Expect = 7e-63
 Identities = 132/340 (38%), Positives = 209/340 (61%), Gaps = 4/340 (1%)

Query: 206 VTWLLTNLICSPLMQVVTQANAIA--EGNLAHRLDRKTIGHDELGELADACSKMQNNLRL 263
           V WL+ + I  PL Q+V   N IA  EG+L  RL       DELG +A+  +     L+ 
Sbjct: 375 VIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRA--DELGAIANGFNTFLIKLQG 432

Query: 264 MVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEV 323
           M+ ++++S  +++ + +  + ++ +T+QG+  Q  E+ Q+ATA+ EM +T  +VARN   
Sbjct: 433 MITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQ 492

Query: 324 ASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVDVISNI 383
           A+ A+  + Q A+ G + +R  + SI  + +EIG+    V  L   ++ IN ++  I  I
Sbjct: 493 AAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGI 552

Query: 384 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKA 443
           AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA KTQ++T +I  +IQ LQ   +  
Sbjct: 553 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDV 612

Query: 444 RETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNI 503
                +S+   +  V+ + +  +A+E I    S I DM  QIASA  EQ +V+E+++RN+
Sbjct: 613 VRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNV 672

Query: 504 ERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
             I + A +VA G+  ++ + A+L++LA Q +  + +F++
Sbjct: 673 INIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712