Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  256 bits (653), Expect = 2e-72
 Identities = 179/543 (32%), Positives = 294/543 (54%), Gaps = 9/543 (1%)

Query: 5   KNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMS 64
           +N+ IG + +++FGV+A + +  G +    +  ++   L +    +PS+  ++     ++
Sbjct: 4   RNMRIGLRASLSFGVLASLLVIVGMFGLGQMAKLRQSALVIEASWMPSIENIHDSAAIVA 63

Query: 65  SVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWT-DHERSIFMPVKNLW 123
           S+R   + L ++TDE+ I ++ + +        Q L  + +++ + D ER +   ++   
Sbjct: 64  SIRLEALRL-ATTDESRIRDNSKALITRQHTELQTLLDHHKTLLSGDEEREMLTQLEGNA 122

Query: 124 NEYLRQLGSFNNDILQKEMIKAQQDL--QRSLPTFEKLETAIDELLKLNLSYVDNNRSEL 181
           N YL  +G     ++ K+  +   DL   R  P    L  ++ +++  N S V       
Sbjct: 123 NAYLSLVGQIVA-LVDKDQQQDAIDLLNSRLAPQGVILNKSLTDMITFNQSGVQTAVDSA 181

Query: 182 TELIDNISEFSVASIVAL-LAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRK 240
            +   + +++ V SI+ L L     + WLLT  I +PL Q +  A  IA G+L+  +   
Sbjct: 182 AQTYSS-AQWIVGSIIVLALTATLLLAWLLTRSITAPLGQALIVARTIASGDLSQPI--A 238

Query: 241 TIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEV 300
             G DE  +L  A + MQ  L+  +  I  SA QL  A +E+S+V EQ+++ +Q Q +E+
Sbjct: 239 VSGKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDEI 298

Query: 301 MQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTE 360
            Q ATA+ EM + V EVA N   +++AS+ S + +  G  Q+     SIQ++  E+    
Sbjct: 299 EQAATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQNLVDEVLGAS 358

Query: 361 QRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAG 420
            +   L  QAQ I+ V++VI  IA QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA 
Sbjct: 359 NKAEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQ 418

Query: 421 KTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIAD 480
           +TQ ST +I ++I  +Q   Q   E  N+S E   H ++++     A+E+I    SQI+ 
Sbjct: 419 RTQDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQISQ 478

Query: 481 MTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQR 540
             + IASA  +Q  V+ ++ R++  I + + Q A G++  + +  ELS+LA  L   V R
Sbjct: 479 RNLVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVAR 538

Query: 541 FRL 543
           F L
Sbjct: 539 FVL 541