Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  249 bits (636), Expect = 2e-70
 Identities = 148/351 (42%), Positives = 217/351 (61%), Gaps = 3/351 (0%)

Query: 193 VASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELAD 252
           +A+++AL+ F     W +T  I  PL Q +  A  +A G+L+H L   ++  DELG+L  
Sbjct: 291 LATVLALI-FGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLT--SMRQDELGQLQR 347

Query: 253 ACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKS 312
           A   M   LR ++  I    TQ+A A +++SAV+EQTS G+  Q+ E  Q+ATAM EM +
Sbjct: 348 AMQSMTVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAA 407

Query: 313 TVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQ 372
           TV EVARN E AS+A+  + Q A  G + +      I+ +  E+G +   + +L+ ++ +
Sbjct: 408 TVQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDK 467

Query: 373 INMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEI 432
           I  V+DVI ++A+QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA +TQ+ST +I E+
Sbjct: 468 IGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEEL 527

Query: 433 IQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQ 492
           I  LQ+  Q+     +NSR L +  VE  +    A+  I    S I  M  QIA+A  +Q
Sbjct: 528 IVGLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQ 587

Query: 493 DSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
            +V+EE++R++  + + ++Q A  S   A S  EL++L + LQ  V RFR+
Sbjct: 588 SAVAEEINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRFRV 638