Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  252 bits (643), Expect = 3e-71
 Identities = 150/401 (37%), Positives = 246/401 (61%), Gaps = 10/401 (2%)

Query: 149 LQRSLPTFEKLETAIDELLKLNLSYVDNNRSELTELIDNISE------FSVASIVALLAF 202
           L+ +  T EK +  +++ L   L   D    + T+  D+ +E        V +   LL  
Sbjct: 239 LKEAQLTTEKSQNQLEQQLDQLLGQSDLLSQDQTQRRDHEAEQARTQTLGVTAAALLLGV 298

Query: 203 MSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELADACSKMQNNLR 262
           ++A  W++   I +PL + ++ AN IAEG+L+H +  +T   DELG+L  + ++M  NLR
Sbjct: 299 LAA--WVIAGQIVTPLRKALSVANRIAEGDLSHEV--QTRRKDELGQLQHSMTQMTLNLR 354

Query: 263 LMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTE 322
            ++  I  +A Q+A A +E+S ++EQT  G+  Q+EE  Q+A AM +M +T  EVAR+ E
Sbjct: 355 GLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQEVARHAE 414

Query: 323 VASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVDVISN 382
            AS A+  ++   ++G Q +  V   I+H+  E+ R+ Q +L L+ ++Q+I  V+DVI +
Sbjct: 415 QASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIGSVLDVIKS 474

Query: 383 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQK 442
           +++QTNLLALNAAIEAARAGE G+GFAVVADEVRSLA +TQQS  +I E+I  L +  Q+
Sbjct: 475 VSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIGGLHSGTQQ 534

Query: 443 ARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRN 502
             +  + SR L ++ V  ++    A+ +I      I +M  QIA+A  EQ +V+EE++R+
Sbjct: 535 VADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSAVAEEINRS 594

Query: 503 IERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           + ++ ++++Q A  S   A +  EL++L + LQ  V +F++
Sbjct: 595 VLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQFKV 635