Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  241 bits (616), Expect = 5e-68
 Identities = 154/421 (36%), Positives = 241/421 (57%), Gaps = 9/421 (2%)

Query: 124 NEYLRQLGSFNNDILQKEMIKAQQDLQRSLPTFEKLETAIDELL-KLNLSYVDNNRSELT 182
           NE    + +F+  + +   + AQ+ +      +++L    D+++ ++N +Y   ++S   
Sbjct: 243 NEVAGHIAAFSEKLGEYTGLLAQEKV-----VYKQLHDRADQVVSRVNQAYGAEDQSMQA 297

Query: 183 ELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTI 242
           +L  +      +S +ALL  + A  W++T LI +PL  V+  A  IA G+L+ R++    
Sbjct: 298 QLKKSSMLILGSSALALLVGLIAA-WVITRLIVAPLRSVIAVAQQIAAGDLSGRMEVNR- 355

Query: 243 GHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQ 302
             DE+G+L  A  +M N L  MV  +     QLA +   +S+V+EQT+  +  Q+EE  Q
Sbjct: 356 -RDEIGQLMQAMQQMGNGLSQMVSGLQAGIEQLASSAHSLSSVTEQTNVEVSSQKEETEQ 414

Query: 303 IATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQR 362
           +ATAM +M +TV +VARN E A+ A++ + +  + G + +R     I+ +          
Sbjct: 415 VATAMNQMTATVHDVARNAEEAAQAAQTADEKVDSGQRVVRQSLQRIELLATSSSSASAS 474

Query: 363 VLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKT 422
           +  L ++ Q I  V+ VI ++AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T
Sbjct: 475 IESLSAEIQHIGSVLSVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRT 534

Query: 423 QQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMT 482
           Q ST +I  ++  L++ AQ + +    S EL+   V  + ET+ A+  I    S I  M 
Sbjct: 535 QHSTEEIERLVSTLRSAAQSSVQQIQQSGELVKLAVSDALETESALGSIAVAVSLIQQMN 594

Query: 483 IQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFR 542
            QIA+A  EQ SV+EE++R++  I  SA Q A      A S  +L+QL ++L+  V  FR
Sbjct: 595 QQIAAAAEEQSSVAEEINRSVTSIRASADQSALSMQGNAASSIQLAQLGAELKGMVGHFR 654

Query: 543 L 543
           L
Sbjct: 655 L 655