Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  206 bits (523), Expect = 3e-57
 Identities = 128/349 (36%), Positives = 190/349 (54%), Gaps = 7/349 (2%)

Query: 200 LAFMSAVTWLLTNLICSPLMQVVTQANAIAE-----GNLAHRLDRKTIGHDELGELADAC 254
           L  +  +  L +  +   L ++   ANA+A+     G+L  RLD ++   DE+G LAD  
Sbjct: 293 LGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRS--QDEVGLLADKF 350

Query: 255 SKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTV 314
           +K  + L  MV+ +   +  L    D  +A + Q S+ ++ QQ+E+  +ATA+ EM S  
Sbjct: 351 NKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASAT 410

Query: 315 AEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQIN 374
           AE+A N E  +  +  S Q    G  QM+    SI  + QE+    + + ELE  A +I+
Sbjct: 411 AEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEIS 470

Query: 375 MVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQ 434
            ++  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ +T  ST +I   I 
Sbjct: 471 TILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIA 530

Query: 435 NLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDS 494
            LQ     A      S +L+   V    +T  +++ I     QI+DM  QIASA  EQ  
Sbjct: 531 GLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSL 590

Query: 495 VSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           V+ +++ N E + E + Q+A+ +  + Q    L  +A +L   + RF+L
Sbjct: 591 VTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639