Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 1e-60
 Identities = 139/359 (38%), Positives = 210/359 (58%), Gaps = 14/359 (3%)

Query: 192 SVASIVALLAFM--SAVTWLLTNLICSPLMQVVTQANAIAEGNLAH--RLDRKTIGHDEL 247
           S+ + VALLA +  +   WL+T  I  PL Q +  A  IA+G+L+    + R+    DE+
Sbjct: 296 SLLTSVALLAMVVGALAAWLITLQITQPLRQTLAVAARIAKGDLSQVDTVQRR----DEM 351

Query: 248 GELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAM 307
           G+L  +  +M  +LR ++  I     QL+ A  +++A SE T   +  Q+EE  Q+ATAM
Sbjct: 352 GQLQTSMREMTLSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAM 411

Query: 308 AEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQ---RVL 364
            +M +TV EVA+N E AS A+ ++ Q A VG Q    V+++I  + Q  G+ +     + 
Sbjct: 412 NQMSATVQEVAQNAEQASLAATNADQQAQVGDQ---VVSEAIGRIEQLAGQMDHCLAAMQ 468

Query: 365 ELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQ 424
            L  ++Q+I  ++DVI +++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T  
Sbjct: 469 HLAGESQRIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTST 528

Query: 425 STGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQ 484
           +T +I ++I +L     +     ++S+ L    VE S+    A+ QI    S I  M  Q
Sbjct: 529 ATEEIGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQ 588

Query: 485 IASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           IA+A  EQ  V+E+++R++  + + + Q +  S   A S  EL QL  QL+  V RF +
Sbjct: 589 IATASEEQSVVAEQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFSI 647