Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  204 bits (519), Expect = 8e-57
 Identities = 127/353 (35%), Positives = 204/353 (57%), Gaps = 6/353 (1%)

Query: 193 VASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEG--NLAHRLDRKTIGHDELGEL 250
           +   VAL++ +  V  LL   +  P+ +V      I  G  +L+HRLD      DELG+L
Sbjct: 297 IGGAVALVSLLLVV--LLARGLVRPIRRVTAALVQIGSGAGDLSHRLDDSR--QDELGDL 352

Query: 251 ADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEM 310
           A   ++  ++ R ++ E+++++ +L  AV++V+ V + T++    QQE    +ATA+ EM
Sbjct: 353 ARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEM 412

Query: 311 KSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQA 370
             TV ++ARN   A+ AS+ +   A    + ++     I+ ++ +IG+    V +L  + 
Sbjct: 413 GLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEV 472

Query: 371 QQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIV 430
             ++ V+ VI +I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQ ST ++ 
Sbjct: 473 ASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQ 532

Query: 431 EIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACG 490
           ++IQ L+  A  A  +    ++     VE SQ T  ++  I  Q   I+DM  Q+A+A  
Sbjct: 533 QMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATE 592

Query: 491 EQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           EQ +V+EE++R ++ I++ A++ A       + C  L  LA  L   +  FRL
Sbjct: 593 EQSAVTEEINRTVQGISDLARETAAEVQGCREECQALRGLADDLARQMGGFRL 645