Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  265 bits (678), Expect = 3e-75
 Identities = 174/540 (32%), Positives = 287/540 (53%), Gaps = 5/540 (0%)

Query: 5   KNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMS 64
           +N+ I  +  + F +I L+ L  G +    +  I+   + +   ++PS+ +++ +     
Sbjct: 4   RNMNIAPRALLGFALIGLLMLGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTALNL 63

Query: 65  SVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWN 124
            +R     LL + + A   + +  ++    QI +    Y   I    E++ F     L N
Sbjct: 64  RMRTLSYRLLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQAAFDQYGQLLN 123

Query: 125 EYLRQLGSFNNDILQKEMIKAQQDLQRS--LPTFEKLETAIDELLKLNLSYVDNNRSELT 182
           +Y RQL S    + Q + +   +DL     L   E++   +D L+++N         +  
Sbjct: 124 QY-RQLESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTLVRINTDQTRATNEKAA 182

Query: 183 ELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTI 242
                     +  +VA      A  +LLT  I  P+ + +  A  +A+G+L H +  +  
Sbjct: 183 NQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVI--RAE 240

Query: 243 GHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQ 302
           G DE   L  A ++MQ+ LR  +++I  SATQLA A +E++AV++++++G+Q Q  E+ Q
Sbjct: 241 GTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQ 300

Query: 303 IATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQR 362
            ATA+ EM S V EVARN    S+AS ++S+    G   +     +I+ ++ ++  T + 
Sbjct: 301 AATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKL 360

Query: 363 VLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKT 422
           +  L  Q++ I  V+DVI  +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T
Sbjct: 361 ITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 423 QQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMT 482
           QQST +I  +I ++Q   ++A E+   S E     +  ++    A++ I    +QI +  
Sbjct: 421 QQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERN 480

Query: 483 IQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFR 542
           + IASA  EQ  V+ E+ RN+  IN+ + Q A G+   + + AELS+LA  L   V RFR
Sbjct: 481 LVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARFR 540



 Score = 28.1 bits (61), Expect = 9e-04
 Identities = 24/157 (15%), Positives = 60/157 (38%), Gaps = 3/157 (1%)

Query: 387 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARET 446
           T+++      EAAR     R  A + D++R    +   S   +    + L A   ++   
Sbjct: 234 THVIRAEGTDEAARLL---RAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARG 290

Query: 447 TNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNIERI 506
                  I        E   A+E++   +   ++ + + + + G+   +  E    IER+
Sbjct: 291 LQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERM 350

Query: 507 NESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           +   +  A+  +  A+   ++ ++   ++    +  L
Sbjct: 351 SGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTNL 387