Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  239 bits (609), Expect = 2e-67
 Identities = 155/421 (36%), Positives = 236/421 (56%), Gaps = 9/421 (2%)

Query: 124 NEYLRQLGSFNNDILQKEMIKAQQDLQRSLPTFEKLETAIDELL-KLNLSYVDNNRSELT 182
           NE    +  FN  + +   + AQ+        +++L     +++ ++N +YV  + S   
Sbjct: 99  NEVSGHIAGFNEKLAEYTGLLAQEKT-----VYDQLHQRAAQVVDRVNQAYVAEDASMQA 153

Query: 183 ELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTI 242
           EL  N      +S +ALL  + A  W++T LI +PL  V+  A  IA G+L  +++    
Sbjct: 154 ELKKNTVLIIGSSALALLVGLLAA-WVITRLIVAPLRSVIRVAQQIAAGDLTAKVE--VT 210

Query: 243 GHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQ 302
             DE+G+L  A  +M   L  +V  +     +LA +   +SAV+EQT+  +  Q+EE  Q
Sbjct: 211 RRDEMGQLMLAMQQMAAGLGTIVSGLQAGIERLAGSAQSLSAVTEQTNLEVNSQKEETEQ 270

Query: 303 IATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQR 362
           +ATAM +M +TV +VARN E A+ A++ +      G Q +R     I+ +          
Sbjct: 271 VATAMNQMTATVHDVARNAEEAALAAQTADDKVESGQQVVRQSMARIEQLADSATSASSS 330

Query: 363 VLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKT 422
           +  L ++ Q I  V++VI ++AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T
Sbjct: 331 IESLSAEIQNIGTVLEVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRT 390

Query: 423 QQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMT 482
           QQST +I  ++  L+A AQ + +   +S EL+   V  + +T+ A+  I    S I  M 
Sbjct: 391 QQSTEEIERLVSALRAAAQSSVQQIRSSGELVKLAVSDALQTESALGSIAAAVSLIQQMN 450

Query: 483 IQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFR 542
            QIA+A  EQ SV+EE++R++ +I  SA   +      A S  EL+QL  +L+  V  FR
Sbjct: 451 QQIAAAAEEQSSVAEEINRSVTQIRASADHSSVAMRGNAASSVELAQLGGELRSMVGHFR 510

Query: 543 L 543
           L
Sbjct: 511 L 511