Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  224 bits (571), Expect = 8e-63
 Identities = 137/403 (33%), Positives = 230/403 (57%), Gaps = 10/403 (2%)

Query: 145 AQQDLQRSLPTFEKLETAIDELLKLNLSYVDNNRSELTELIDNISEFSVASIVALLAFMS 204
           A++ L  S     +   A++ LL L      +  S++   I   + F +  ++  +A  +
Sbjct: 278 AEKALNASDSNIAQAVVALENLLNLADKKASHVESQVNGAIATGNTFVIVVVIISIAVAA 337

Query: 205 AVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELADACSKMQNNLRLM 264
            + ++    I  PL +V       + G+L HRLD      DE G LA  C+ +  NL+ +
Sbjct: 338 FIGYVTVRAITRPLYRVNELLTVASSGDLTHRLDDSA--QDEFGLLARNCNTLIGNLKEL 395

Query: 265 VEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVA 324
           +  I   A QLA A ++ SAV+ QT+  +Q Q+ ++ Q+ATA  EM ST   V +N E  
Sbjct: 396 ITAINVRAEQLAAASEQTSAVTAQTTHSIQDQKSQIGQVATATTEMHSTSQLVVQNAEDT 455

Query: 325 SDASRDSSQHANVGSQQMRAVN----DSIQHVNQEIGRTEQRVLELESQAQQINMVVDVI 380
               R    HA+  ++ +R ++    ++I+ +++++      + +L   +  I  ++DVI
Sbjct: 456 LSQIR----HADAEAENVRQISLENKNTIEILSRDVQEAADVINKLHQDSASIGGILDVI 511

Query: 381 SNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACA 440
             +A+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ+ST +I  +I+ LQA A
Sbjct: 512 RGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTQEINAMIEVLQAGA 571

Query: 441 QKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELS 500
           +KA    N  +E    CV Q+++  QA++ I     +  D++ QI  +  EQ++VS+E+S
Sbjct: 572 EKAVSVMNQGKEQTAACVAQTEKATQALDIISDAVHKAHDVSSQIEQSAREQNTVSQEIS 631

Query: 501 RNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
             +E I   A++   G+   ++S  E+++LA +LQ ++++F++
Sbjct: 632 EKLETIVGIAEETTAGAQQTSESSHEVARLAEELQQSIRQFKV 674