Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., carbohydrate porin from Pectobacterium carotovorum WPP14

 Score =  133 bits (335), Expect = 1e-35
 Identities = 119/435 (27%), Positives = 186/435 (42%), Gaps = 61/435 (14%)

Query: 29  FNGYFRAGTGISGNGNADQAVNKAGTGRLGNENDNYYEFGFAEEL-----KTGEQTWKVE 83
           + GY R+G     NG+  Q+      GR GNE+  +++    + +     KT     K++
Sbjct: 131 YTGYLRSGWATGTNGSP-QSYAIGSLGRFGNEHSGWFDLLLTQRVYNKDGKTAHAVVKLD 189

Query: 84  SMIAQGNSGANGW---EDGDFNVAQFN---VQAKGLLASDQEAVMWAGKRYYQRKDIHIT 137
             + Q  S   GW     G+ NV QF+   +   G L    EA  W GK      +I + 
Sbjct: 190 GNVGQQYSA--GWFGDNAGNENVLQFSDLYLTTNGFLPFAPEADFWVGKHVLPVYEIQML 247

Query: 138 DFYFLNT-SGTGGGIENLSVGNQKLSVALV-----------------QDGDNTNSSGYIF 179
           D+      +G G GIEN++ G  KL +AL                  +D D T  +    
Sbjct: 248 DWKSDRVYAGAGVGIENMNAGPGKLDLALTREDVNVYSREYADPNIGRDADKTKMNTNTM 307

Query: 180 DARLANIGLWENASLELAMAYNFATEKD------SKNEV--ADDGVLVSAILHQGLSN-- 229
           + R  N+ LW++ +L L   Y  A + D      S NE     D  L +AI+ Q L +  
Sbjct: 308 EIRYKNLPLWDDGALTLIGKYVMANKSDGQKHNESSNEYFKMKDSYLATAIVKQKLDSRG 367

Query: 230 GFNQTVFQYGTAGYGAQAANFWGAGSYYARGTEAFNDASG---FRLLNWGVINLGENWEM 286
           GFN+   Q       +  A +        +G   + D +G   FR+++ G + L +N  M
Sbjct: 368 GFNEFTLQSANNSIASGFARYDDGNPSIGQGENYYGDHTGGNAFRVISQGEMYLHDNVIM 427

Query: 287 GHQLAYLAGSDIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGYNA 346
            + L Y  G+DI           +  TG   D +    V+RP Y W++  +T  E G+  
Sbjct: 428 ANALVYSWGNDI----------YSYETGAHSDFESIRTVIRPAYIWDNYNQTGVELGWFT 477

Query: 347 GEKISNGGLATEDFGNAKFTVAQAWAMGDSFW-ARPELRVYGTYLLDTEND----KAFGD 401
            +  +  G+   + G  K T+  A  +  S   +RPE+R YGTYL   +N+    K   +
Sbjct: 478 QKNTNQAGVNFRESG-YKTTLYHALKVDTSILNSRPEIRFYGTYLNILDNEISTYKFADN 536

Query: 402 DDTEFVVGIQVEAWW 416
              +F VG+Q E WW
Sbjct: 537 KKNQFTVGVQAEVWW 551