Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., carbohydrate porin from Erwinia tracheiphila SCR3

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 113/432 (26%), Positives = 175/432 (40%), Gaps = 65/432 (15%)

Query: 28  DFNGYFRAGTGISGNGNADQA---VNKAG-----TGRLGNENDNYYEFGFA-EELKTGEQ 78
           +F+GY R+G  ++ +    Q    +  AG      GRLGNE D Y E     ++      
Sbjct: 111 EFHGYARSGLLMNSSAAKTQGGPTMTPAGETGGHVGRLGNEPDTYVEMNLEHKQTLANGA 170

Query: 79  TWKVESMIAQGNSGANGW--EDGDFNVAQFNVQAKGL---LASDQEAVMWAGKRYYQRK- 132
           T + + M+A G    N W       NV Q  V+   L       ++A +WAGKR+ +   
Sbjct: 171 TTRFKVMMADGQRTYNDWTSNTSSLNVRQAFVELGHLPTFTDGFKDATVWAGKRFDRDNF 230

Query: 133 DIHITDFYFLNTSGTGGGIENLSVGNQ---KLSVALVQDGDNTNSSGYIFDARLANIGLW 189
           DIH  D   +  +GTG G+ ++  G Q    LS+     GD  NS     +  L +   +
Sbjct: 231 DIHWLDSDVVFLAGTGAGVYDMRWGEQGHSNLSLYGRTFGDIENSENTAQNYILTSNNFY 290

Query: 190 ENASLELAMAYNFATEKDS---------KNEVADDGVLVSAILHQ----GLSNGFNQTVF 236
               L+  ++   A + D          K++ A++GV     LH     GL  G ++T  
Sbjct: 291 --GPLQFMVSGMRAKDNDDRLDTEGNKVKSDAANEGVHALVGLHNDSFYGLREGLSKTAL 348

Query: 237 QYGTAGYGAQAANFWGAGSYYARGTEAFNDASGFRLLNWGVINLGENWEMGHQLAYLAGS 296
            YG  G GA+  N    G+         + A  +RL  +G+  LG  W +    A LA +
Sbjct: 349 LYG-HGLGAEVKNVGSDGA-------LLSQADTWRLATYGITPLGGGWHLAP--ALLAQT 398

Query: 297 DIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGYNAGEKISNGGLA 356
                  GD  +    T     I + +      Y+ +     +   GYN    +S G   
Sbjct: 399 SRNRYAKGD--SYQWATANLRVIQEINQNFEMQYEGSYQYMDLRPEGYNNRNAVSGGFY- 455

Query: 357 TEDFGNAKFTVAQAWAMGD--SFWARPELRVYGTYL-----LDT-ENDKAFGDD----DT 404
                  K TVA     GD   F  RPE+R++ +++     LD      AFG D      
Sbjct: 456 -------KLTVAPTLKAGDVGDFLKRPEIRLFASWMDWDHHLDNYAGSDAFGSDGFKAGG 508

Query: 405 EFVVGIQVEAWW 416
           E+  G+Q+E W+
Sbjct: 509 EWNFGVQMETWF 520