Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., maltoporin LamB from Escherichia coli ECRC62

 Score =  217 bits (552), Expect = 6e-61
 Identities = 154/468 (32%), Positives = 224/468 (47%), Gaps = 74/468 (15%)

Query: 1   MELTMKKVSVIAAAVAATLAAGSAFAVDFNGYFRAGTGISGNGNADQAVNKAGTG---RL 57
           M +T++K+  +A AVAA + +  A AVDF+GY R+G G +G+G   Q     G     RL
Sbjct: 1   MMITLRKLP-LAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGEQQCFQTTGAQSKYRL 59

Query: 58  GNENDNYYEFGFAEEL-KTGEQTWKVESMIAQGNSGANGWEDGDFNVAQFNVQAKGLLAS 116
           GNE + Y E    +E+ K G++++  ++ +A   +  N WE  D    + NVQ K L+  
Sbjct: 60  GNECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWEATDPAFREANVQGKNLIEW 119

Query: 117 DQEAVMWAGKRYYQRKDIHITDFYFLNTSGTGGGIENLSVGNQKLSVALVQDGDNTNSSG 176
              + +WAGKR+YQR D+H+ DFY+ + SG G G+EN+ VG  KLS+A  +  +   SS 
Sbjct: 120 LPGSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDVGFGKLSLAATRSSEAGGSSS 179

Query: 177 Y---------------IFDARLANIGLWENASLELAMAYNFATEKDSKNEV---ADDGVL 218
           +               +FD RLA + +    +LEL + Y  A  +D+   V   + DG L
Sbjct: 180 FASNNIYDYTNETANDVFDVRLAQMEINPGGTLELGVDYGRANLRDNYRLVDGASKDGWL 239

Query: 219 VSAILHQGLSNGFNQTVFQYGTAGYGAQAANFWGAGSYYARGTEAF-----NDASGFRLL 273
            +A   Q +  GFN+ V QY T    +Q       GS  A   E F     N+    R+L
Sbjct: 240 FTAEHTQSVLKGFNKFVVQYATDSMTSQGKGL-SQGSGVAFDNEKFAYNINNNGHMLRIL 298

Query: 274 NWGVINLGENWEMGHQLAYLAGSDIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWN 333
           + G I++G+NW+M +   Y    DI   +  D   K            ++V +RPMYKW 
Sbjct: 299 DHGAISMGDNWDMMYVGMY---QDI--NWDNDNGTK-----------WWTVGIRPMYKWT 342

Query: 334 DTMRTVFEAGYNAGEKISNGGLATEDFGNAKFTVAQAWAMGDSFWARPELRVYGTYLLDT 393
             M TV E GY+  E    G    +     K T+AQ W  GDS W+RP +RV+ TY    
Sbjct: 343 PIMSTVMEIGYDNVESQRTG----DKNNQYKITLAQQWQAGDSIWSRPAIRVFATYAKWD 398

Query: 394 E------------------------NDKAFG-DDDTEFVVGIQVEAWW 416
           E                        N  +FG  D  E+  G Q+E WW
Sbjct: 399 EKWGYDYNGDSKVNPNYGKAVPADFNGGSFGRGDSDEWTFGAQMEIWW 446