Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., carbohydrate porin from Dickeya dianthicola ME23

 Score =  131 bits (330), Expect = 4e-35
 Identities = 123/432 (28%), Positives = 191/432 (44%), Gaps = 64/432 (14%)

Query: 29  FNGYFRAGTGISGNGNADQAVNKAGTGRLGNENDNYYEFGFAEEL--KTGEQTW---KVE 83
           ++GYFR+G   +G+  + ++      GR GNE+ ++Y+  F + +  K G+  +   K++
Sbjct: 99  YSGYFRSGWA-TGSQGSPKSWAIGSLGRFGNEHTSWYDLIFKQRVFNKDGKSAYGVIKLD 157

Query: 84  SMIAQGNSGANGW---EDGDFNVAQFN---VQAKGLLASDQEAVMWAGKRYYQRKDIHIT 137
             + Q  SG  GW   +  + N  QF+   +   G L    EA  W GK      +I + 
Sbjct: 158 GNVGQSYSG--GWFGEDSNNENKLQFSDIYLTTTGFLPFAPEADFWVGKHALPVYEIQML 215

Query: 138 DFYFLNTSGTGG-GIENLSVGNQKLSVALVQ---DGDNTNSSGY------IFDARLANIG 187
           D+    T  +   G+EN++ G   + VAL +   D  N + + Y        +AR   I 
Sbjct: 216 DWKSNKTDSSASVGVENINAGAGSIDVALTREDIDVYNRDLTKYQQMNTNAVEARYKGIP 275

Query: 188 LWENASLELAMAYNFATEKDS-KNEVAD-------DGVLVSAILHQGLSN-GFNQTVFQY 238
           LW  ASL +   Y  A + D+ KN  A+       D  L   +L Q L+N GFN+   Q 
Sbjct: 276 LWNGASLMVLGKYAMANKNDAQKNNEANNNYFPMKDSWLGGVVLRQALANNGFNEFTAQL 335

Query: 239 GTAGYGAQAANFWGAGSYYARGTEAFNDASG---FRLLNWGVINLGENWEMGHQLAYLAG 295
                 +  A + G+  + A   + + D SG    RL++ G + L  +  M + L Y  G
Sbjct: 336 ANNSIASSLARYAGSSPFVAVNGKYYGDHSGGTALRLISQGEMYLRPDVIMANALVYTRG 395

Query: 296 SDIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGY-------NAGE 348
            D+   +  D       TG   D D    VVRP Y W++  ++  E GY        AG+
Sbjct: 396 QDV---YSYD-------TGAHTDFDSVRAVVRPAYIWSNYNQSGVELGYFSQTNKDQAGK 445

Query: 349 KISNGGLATEDFGNAKFTVAQAWAMGDSFWARPELRVYGTYL--LDTENDK-AFGDD-DT 404
             +  G  T  F   K   +          +RPE+R YGTY+  LD E D+  F D    
Sbjct: 446 YFTESGYKTTLFHTIKVDTSM-------LASRPEIRFYGTYIRVLDNELDQFIFADSKKN 498

Query: 405 EFVVGIQVEAWW 416
           +F  G+Q E WW
Sbjct: 499 QFTAGVQAEVWW 510