Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., carbohydrate porin from Dickeya dianthicola ME23

 Score = 87.4 bits (215), Expect = 9e-22
 Identities = 114/450 (25%), Positives = 177/450 (39%), Gaps = 71/450 (15%)

Query: 16  AATLAAGSAFAVDFNGYFRAGTGI-----SGNGNADQAVNKAG-----TGRLGNENDNYY 65
           A T     A   +F+GY R+G  I     S   N    +  AG      GRLGNE+D Y 
Sbjct: 110 ALTSKRSVADGFEFHGYARSGLAIHDSVTSSKANIGPGLTPAGETGGYVGRLGNEDDTYL 169

Query: 66  EFGFAEELKTGE-QTWKVESMIAQGNSGANGW--EDGDFNVAQFNVQAKGL---LASDQE 119
           E       K     T + + M+A G    N W     D NV +  V+   L     + ++
Sbjct: 170 ELKLEHRTKLDNGATTRFKVMMADGQRSYNDWTASTSDLNVREAFVELGSLPTFTGAFKD 229

Query: 120 AVMWAGKRYYQRK-DIHITDFYFLNTSGTGGGI----------ENLSVGNQKLSVALVQD 168
             +WAGKR+ +   DIH  D   +  +GTGGGI           NLS+  + L      D
Sbjct: 230 TTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKPVDGWKTNLSLYGRSLGEITTLD 289

Query: 169 GDNTN----SSGYI--FDARLANIGLWENASLELAMAYNFATEKDSKNEVADDGVLVSAI 222
            +  N    S+ ++  F   L+ +    N   E     N   +  +     D+G    A 
Sbjct: 290 NEIQNYIVTSNNFVGPFQFMLSGLRARNNDIKENTGRNN--ADNVTNTNAGDNGYHALAA 347

Query: 223 LH----QGLSNGFNQTVFQYGTAGYGAQAANFWGAGSYYARGTEAFNDASGFRLLNWGVI 278
            H     GL +G ++    YG  G G +  +    G+          +A+ +RL  +G  
Sbjct: 348 WHGDSFYGLRDGTSKVALLYG-HGLGGEVKSIGSDGN-------LTQNANTWRLATYGTT 399

Query: 279 NLGENWEMGHQLAYLAGSDIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRT 338
            L + W      A LA +       GD     T+  +   I + +      Y+ +     
Sbjct: 400 ALNKTWSFAP--AILAQTSKDRYVQGDDYRWATFNARF--IQEITENFALAYEGSYQYMN 455

Query: 339 VFEAGYNAGEKISNGGLATEDFGNAKFTVAQAWAMGD--SFWARPELRVYGTYL-----L 391
           +   GY +  ++S G          K T A  + +GD  +  +RPELRV+ +Y+     L
Sbjct: 456 LEPQGYLSRNQVSGGFY--------KLTFAPTFKVGDISNLLSRPELRVFASYMDWDKRL 507

Query: 392 DT-ENDKAFGDD----DTEFVVGIQVEAWW 416
           D   +D AFG        E+  G+Q+E W+
Sbjct: 508 DNYASDDAFGSTGFKAGGEWTFGVQMETWF 537