Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., carbohydrate-specific outer membrane porin, cryptic from Escherichia coli BL21

 Score =  120 bits (302), Expect = 8e-32
 Identities = 117/431 (27%), Positives = 187/431 (43%), Gaps = 62/431 (14%)

Query: 29  FNGYFRAGTGISGNGNADQAVNKAGTGRLGNENDNYYEFGFAEELKTGEQTWKVESMIAQ 88
           +NGY+R+G G + +G+  ++      GR GNE   +++    + +   E   +V++++  
Sbjct: 127 YNGYYRSGWGTASHGSP-KSWAIGSLGRFGNEYSGWFDLQLKQRVYN-ENGKRVDAVVMM 184

Query: 89  -GNSG---ANGW---EDGDFNVAQFN---VQAKGLLASDQEAVMWAGKRYYQRKDIHITD 138
            GN G   + GW     G  N  QF+   V  KG L    EA  W GK    + +I + D
Sbjct: 185 DGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLD 244

Query: 139 FYFLNTSGTGG-GIENLSVGNQKLSVALV-QDGD------------NTNSSGYIFDARLA 184
           +    T    G G+EN  VG  K+ +ALV +D D            NTN+     D R  
Sbjct: 245 WKTQRTDAAAGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTNT----IDLRYK 300

Query: 185 NIGLWENASLELAMAYNFATEKDSKNEVADDG---------VLVSAILHQGLSNGFNQTV 235
           +I LW+ A+L ++  Y  A E  S+ +  D+          +  +++  +    GFN+  
Sbjct: 301 DIPLWDKATLMVSGRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFS 360

Query: 236 FQYGTAGYGAQAANFWGAGSYYARGTEAFNDASG---FRLLNWGVINLGENWEMGHQLAY 292
           F        +    + GA  +       + D +G    RL + G   +G+++ + + + Y
Sbjct: 361 FLVANNSIASNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVY 420

Query: 293 LAGSDIGGQFGGDGANKNTY-TGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGY-NAGEKI 350
             G+DI             Y TG   D +    VVRP Y W+   +T  E GY     K 
Sbjct: 421 SFGNDI-----------YIYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKD 469

Query: 351 SNGGLATEDFGNAKFTVAQAWAMGDS-FWARPELRVYGTYLLDTENDK---AFGDD-DTE 405
           +N     E     K T+   + +  S   +RPE+R Y TY+   EN+     F D+ D +
Sbjct: 470 ANSNKFNE--SGYKTTLFHTFKVNTSMLTSRPEIRFYATYIKALENELDGFTFEDNKDDQ 527

Query: 406 FVVGIQVEAWW 416
           F VG Q E WW
Sbjct: 528 FAVGAQAEIWW 538