Pairwise Alignments

Query, 278 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Maltose operon periplasmic protein MalM from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  120 bits (302), Expect = 3e-32
 Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 22/293 (7%)

Query: 7   LLGGCIALAGCQSTAVVEQVKPNTGQE----VQQIGQLQATKVKLPSTTKVALTKETQYL 62
           L  G  A     S A V  V  NT          + QL  T V    T    L    Q L
Sbjct: 12  LTAGLFASVPGISLAEVNYVPQNTSAAPVIPAAALQQLTWTPVDQSKTQSTQLATGGQRL 71

Query: 63  RNQVIASPVALFEIPADRGQMTLTITSEISD--SVFYPHVMIVDAQGQVVESYEEVTFEY 120
               I  PVA + +PA+ G++TLT+TSE++   SVF P+V+I+D        +    F Y
Sbjct: 72  DVAGITGPVAAYSVPANIGELTLTLTSEVNKQASVFAPNVLILDQNMTPSAFFPSSYFTY 131

Query: 121 RKPRLHLGNRLVAELDFYPPQGYKSLFVLVYTKQQDLKGVTYVAHPARIDAEARGNYLPE 180
           ++P +   +RL   +   P  G + L+VLV+T ++DL+  T +  PA+  A+  GN +P+
Sbjct: 132 QQPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTTLLDPAKAYAKGVGNSIPD 191

Query: 181 VKDIPVPHTLTGTIELDVSGPSFLS------FVRSEDRQTTTSTDAA----------KTQ 224
           + D    HT  G ++L V   S  S      F  S     T    AA          K  
Sbjct: 192 IPDPVARHTTDGVVKLKVKTNSSSSVLVGPLFGSSGTGPVTVGNTAAPVAAPAPVAPKKS 251

Query: 225 IQVQPDTQTYYFSSIERAVQANDLPKALSLLDEAKALGIEGAQEVFVKAVNAR 277
             +  DT++Y+  +I+ AV   D+ KAL LLDEA+ LG   A+  F+ +V  +
Sbjct: 252 EPMLNDTESYFNKAIKDAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGK 304