Pairwise Alignments
Query, 385 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 887 a.a., hypothetical protein from Hydrogenophaga sp. GW460-11-11-14-LB1
Score = 56.2 bits (134), Expect = 4e-12
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 16/244 (6%)
Query: 79 RNSLKEALFWYEKAAHLD--NIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLA 136
R ++AL W KAA + A+ G + + + D + +++ V G G+
Sbjct: 282 RQDARQALEWARKAADAGEGSAQALIGTLYL-EGSGVDKDLGQAVSWFRKAVEG--GNPM 338
Query: 137 AKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTF 196
++ G + G GV + + L +EAA+ +A +G +A +++
Sbjct: 339 GQWALGRLYATGVGVAKDETEAARLFREAADQGLAEAQAELGTALADGRGVAKDEAEAVR 398
Query: 197 WYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAWIDR 256
WY +AA G E LG G+G D A +W +++ G ++ G + +R
Sbjct: 399 WYRRAAEQGHVEAQNDLGYRYWEGLGVERDVAQAVHWFRKSAATGDATGKFNLGVPY-ER 457
Query: 257 GA-----HGKAIAYIWLFLSASMGYEPA-KNLRDLVGGKLG--VESIVGLQALAKPLQRK 308
G +G+A+ W +A G A NL L LG V+ + ++ + +R
Sbjct: 458 GEGVPRDYGEALR--WYREAAEQGERRAMNNLGHLYEAGLGVKVDHVQAVRWYRQAAERG 515
Query: 309 LATS 312
LAT+
Sbjct: 516 LATA 519
Score = 53.1 bits (126), Expect = 3e-11
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 84 EALFWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEKAKFW--QTCVRGVEGDLAAKFET 141
EAL WY +AA AM + + + + +A W Q RG+ A +
Sbjct: 467 EALRWYREAAEQGERRAMNNLGHLYEAGLGVKVDHVQAVRWYRQAAERGL-----ATAQN 521
Query: 142 GMAWLY--GRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYE 199
+A +Y GRGV + + + ++AAE +A +G + + + W+
Sbjct: 522 NLADMYARGRGVSKDDAEAVRWRRKAAEQGHAEAQDELGHAYSEGKGVQQDDTMAVTWFR 581
Query: 200 KAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAG 250
KAA G A G LG+ +G G D+ A +W +A E+ H A + G
Sbjct: 582 KAAEQGYARGQNNLGRAYHNGQGVERDYAQAAHWYRKAVEQNHAVATGNLG 632
Score = 51.2 bits (121), Expect = 1e-10
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 8/215 (3%)
Query: 43 YRKALERNREQ-ERKERLFKAESGHIPTILFLAKEAERNSLKEALFWYEKAAHLDNIPAM 101
Y +AL RE E+ ER GH L+ A + +A+ WY +AA A
Sbjct: 465 YGEALRWYREAAEQGERRAMNNLGH----LYEAGLGVKVDHVQAVRWYRQAAERGLATAQ 520
Query: 102 YGIVRVCQRIREDVIAKEKAKFWQTCVRGVE-GDLAAKFETGMAWLYGRGVEVNVSRGIG 160
+ + R R ++K+ A+ + + E G A+ E G A+ G+GV+ + + +
Sbjct: 521 NNLADMYARGRG--VSKDDAEAVRWRRKAAEQGHAEAQDELGHAYSEGKGVQQDDTMAVT 578
Query: 161 LIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLGQNLLHG 220
++AAE + +G + + + + WY KA A LG +G
Sbjct: 579 WFRKAAEQGYARGQNNLGRAYHNGQGVERDYAQAAHWYRKAVEQNHAVATGNLGTLYRYG 638
Query: 221 IGGASDFPMACYWLERASEKGHPEAMYHAGEAWID 255
G D A L +A++ GH AM + G +++
Sbjct: 639 TGVTKDPERASQLLRQAADGGHVSAMANLGTMYLN 673
Score = 49.7 bits (117), Expect = 3e-10
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 136 AAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDST 195
AA+ A++ G GV + + + ++AA+A A +G + + +
Sbjct: 266 AAQSVLASAYMLGLGVRQDARQALEWARKAADAGEGSAQALIGTLYLEGSGVDKDLGQAV 325
Query: 196 FWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAWID 255
W+ KA G+ G LG+ G+G A D A A+++G EA G A D
Sbjct: 326 SWFRKAVEGGNPMGQWALGRLYATGVGVAKDETEAARLFREAADQGLAEAQAELGTALAD 385
Query: 256 -RG-AHGKAIAYIWLFLSASMGYEPAKN 281
RG A +A A W +A G+ A+N
Sbjct: 386 GRGVAKDEAEAVRWYRRAAEQGHVEAQN 413
Score = 47.0 bits (110), Expect = 2e-09
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 13/177 (7%)
Query: 83 KEALFWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLA-AKFET 141
++A FW +A ++ A+ ++ + ++ K A + +G++ L A+F
Sbjct: 178 QKAAFWLGRAHAQQHVWAL--VMLAVLHLDGTLMPKNGALALKLVQQGMDRGLPEAQFLK 235
Query: 142 GMAWLYGRGVEVNVSRGIGLIQEAAE-----ANFIDAILFMGGWCVSKDNIAPTPSDSTF 196
G L G GV +V+ G+ I++AA+ A + A +M G V +D +
Sbjct: 236 GWMLLLGEGVPQDVNVGVRWIRQAAQQQVAAAQSVLASAYMLGLGVRQD-----ARQALE 290
Query: 197 WYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAW 253
W KAA G +G L G G D A W +A E G+P + G +
Sbjct: 291 WARKAADAGEGSAQALIGTLYLEGSGVDKDLGQAVSWFRKAVEGGNPMGQWALGRLY 347
Score = 44.3 bits (103), Expect = 1e-08
Identities = 42/224 (18%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 30 KRLEEERRAREEAYRKALE--RNREQERKERLFKA-ESGHIPTILFLAKEAERNSLKEAL 86
+RL ++ + E +++ L+ + E + RL A +SG+ R ++A
Sbjct: 25 ERLRQQHESPEAYFQRQLDAAEQGDAEAQWRLAHAYQSGY----------GTRKDARKAA 74
Query: 87 FWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLAAKFETGMAWL 146
W ++A + AM + + +E A+ + +G +A + + L
Sbjct: 75 QWMRRSADQGHPSAMTDVGVELFHAADPAGWQEAARLFSAAA--AKGGKSAVYNQALTLL 132
Query: 147 YGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGS 206
G+G + + + G+ L++ AAE+ ++A +G + +++ + FW +A
Sbjct: 133 EGKGAQKDTAAGLVLLERAAESGVVNAEFNLGSRYMHGEDVPQDGQKAAFWLGRAHAQQH 192
Query: 207 AEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAG 250
++ L L G + +A +++ ++G PEA + G
Sbjct: 193 VWALVMLAVLHLDGTLMPKNGALALKLVQQGMDRGLPEAQFLKG 236
Score = 31.6 bits (70), Expect = 9e-05
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 109 QRIREDVIAKEKAKFWQTCVRGVEGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEA 168
+R+R+ + E A F + +GD A++ A+ G G + + ++ +A+
Sbjct: 25 ERLRQQHESPE-AYFQRQLDAAEQGDAEAQWRLAHAYQSGYGTRKDARKAAQWMRRSADQ 83
Query: 169 NFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFP 228
A+ +G + A ++ + AA G + LL G G D
Sbjct: 84 GHPSAMTDVGVELFHAADPAGW-QEAARLFSAAAAKGGKSAVYNQALTLLEGKGAQKDTA 142
Query: 229 MACYWLERASEKGHPEAMYHAGEAWIDRGAHGKAI 263
LERA+E G A ++ G ++ HG+ +
Sbjct: 143 AGLVLLERAAESGVVNAEFNLGSRYM----HGEDV 173