Pairwise Alignments

Query, 385 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 33/119 (27%), Positives = 57/119 (47%)

Query: 132 EGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTP 191
           +GDLAA    G A+  G+GV V+ +  + L   AA+A        +G        +A + 
Sbjct: 155 KGDLAAMVALGNAYREGKGVAVDPAEAVRLYTLAAKAGDARGQYSLGVMYDLGLGVAQSN 214

Query: 192 SDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAG 250
           + +  W+ +AA+ G  +    LG  +  G G  S   +A  W ++A+E+G   A++  G
Sbjct: 215 AHALKWFREAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQAAEQGDAGAIFALG 273



 Score = 47.0 bits (110), Expect = 9e-10
 Identities = 35/117 (29%), Positives = 50/117 (42%)

Query: 132 EGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTP 191
           +GD  A+F  G     GRGVE +        ++AAE     AI  +G    +   +    
Sbjct: 227 QGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQAAEQGDAGAIFALGALYEAGTGVERDE 286

Query: 192 SDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYH 248
             +   Y +AA  G A  +  L   L  G G  +D   A     RA+E+G PEA Y+
Sbjct: 287 IQAVELYRQAADQGLALALHNLANMLRQGRGTDADPFEAAMLCRRAAEQGLPEAQYN 343



 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 1/159 (0%)

Query: 85  ALFWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLAAKFETGMA 144
           AL W+ +AA   +  A + +  + Q+ R    + E A  W       +GD  A F  G  
Sbjct: 217 ALKWFREAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQA-AEQGDAGAIFALGAL 275

Query: 145 WLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARM 204
           +  G GVE +  + + L ++AA+     A+  +             P ++     +AA  
Sbjct: 276 YEAGTGVERDEIQAVELYRQAADQGLALALHNLANMLRQGRGTDADPFEAAMLCRRAAEQ 335

Query: 205 GSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHP 243
           G  E        L  G+G   +   A  W  RA++ G P
Sbjct: 336 GLPEAQYNYAAMLALGLGVEKNEDAAIRWFRRAAKSGDP 374



 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 2/116 (1%)

Query: 162 IQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGI 221
           ++ A +   + A++ +G        +A  P+++   Y  AA+ G A G   LG     G+
Sbjct: 149 LRAAVDKGDLAAMVALGNAYREGKGVAVDPAEAVRLYTLAAKAGDARGQYSLGVMYDLGL 208

Query: 222 GGASDFPMACYWLERASEKGHPEAMYHAGE-AWIDRGAHGKA-IAYIWLFLSASMG 275
           G A     A  W   A+++G P+A ++ G      RG    A +A  W   +A  G
Sbjct: 209 GVAQSNAHALKWFREAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQAAEQG 264



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 25/116 (21%), Positives = 49/116 (42%)

Query: 133 GDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPS 192
           GD   ++  G+ +  G GV  + +  +   +EAA+     A   +G        +  +  
Sbjct: 192 GDARGQYSLGVMYDLGLGVAQSNAHALKWFREAAKQGDPQAQFNLGNMIQQGRGVESSAE 251

Query: 193 DSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYH 248
            +  W+++AA  G A  +  LG     G G   D   A     +A+++G   A+++
Sbjct: 252 VAAKWFKQAAEQGDAGAIFALGALYEAGTGVERDEIQAVELYRQAADQGLALALHN 307