Pairwise Alignments

Query, 385 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., sel1 repeat family protein from Magnetospirillum magneticum AMB-1

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 8/224 (3%)

Query: 71  LFLAKEAERNSLKEALFWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRG 130
           LF+  E      ++ + W  +AA   ++ AM G+  V +R +      ++A+        
Sbjct: 147 LFVEGEVHAIGSRDGVSWLAEAAQAGDLRAMMGLADVLERGQGVPPDLDQAEALYRQAAL 206

Query: 131 VEGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIA-- 188
           + GD+ A+F  G   L    +  N +      Q A   +     ++      + D I   
Sbjct: 207 LNGDIEARFRLGRLLLSRPAMWRNPAEEEWNAQAAERKSHPFGAVWYAAKPANADEIKSV 266

Query: 189 ---PTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEA 245
              P  ++   W   AAR G  E    LG   + G+    D      WLE A+ +GH EA
Sbjct: 267 QLRPGINEGERWLRSAARRGHVEAQYLLGSAKVAGLELPMDMVEGVAWLEAAAVQGHAEA 326

Query: 246 MYHAGE-AWIDRGAHGKAIAYIWLF--LSASMGYEPAKNLRDLV 286
           ++  G  A   +G + K     W+   L+A  G E AK  RD +
Sbjct: 327 LFELGNLAAKGQGFYAKDPVRAWVMYELAAGQGEENAKAARDAI 370



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 7/103 (6%)

Query: 187 IAPTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAM 246
           + P P  +  W+  A   G     +   +    G G A D   A  W  +A   GH  A 
Sbjct: 82  LKPDPHTALVWFTLAGAEGHVGAAIEAAKAYQAGKGAARDLNSAGNWWYKAGTLGHAAAR 141

Query: 247 YHAGEAWIDRGAH--GKAIAYIWLFLSASMGYEPAKNLRDLVG 287
               E +++   H  G      WL  +A  G     +LR ++G
Sbjct: 142 TRWVELFVEGEVHAIGSRDGVSWLAEAAQAG-----DLRAMMG 179