Pairwise Alignments
Query, 385 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 331 a.a., TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Score = 52.4 bits (124), Expect = 2e-11
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 38/233 (16%)
Query: 62 AESGHIPTILFLA-------KEAERNSLKEALFWYEKAAHLDNIPAMYGIVRVCQRIRED 114
AE GH +L + + N+L ALFW EKAA + A + V + E
Sbjct: 59 AEQGHCEAQYWLGLRYKDTPTDMKDNTL--ALFWSEKAAQQGHRHAFNTLGWVQEG--ET 114
Query: 115 VIAKEKAKFWQTCVRGVE-GDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDA 173
+A + A+ +G E A++ G + G GVE N ++ + ++AA
Sbjct: 115 GMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAA------- 167
Query: 174 ILFMGGWCVSKDNIA----------PTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGIGG 223
+ G C S++ +A S + WY+K+A S+ ++G G G
Sbjct: 168 ---LQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGI 224
Query: 224 ASDFPMACYWLERASEKGHPEAMYHAGEAWIDRGAHG----KAIAYIWLFLSA 272
D+ A YW +A+++G +A G W+ + HG ++A W SA
Sbjct: 225 KQDYQQAIYWFRKAADQGDDDAYNSIG--WMYKCGHGVEQNYSLALEWFHKSA 275
Score = 50.8 bits (120), Expect = 5e-11
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 43 YRKALER--NREQERKERLFKAESGHIPTILFLAKEAERNSLKEALFWYEKAA------H 94
YRK E+ N Q R++ + +G E+N +AL+W+++AA
Sbjct: 127 YRKGAEQSHNLAQYNLGRMYHSGTG-----------VEQNDT-QALYWFKQAALQGHCAS 174
Query: 95 LDNIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLAAKFETGMAWLYGRGVEVN 154
+ + MYG + C++ A W ++ ++++ G + G+G++ +
Sbjct: 175 QERLAYMYGNGKGCRK------NLSLAALWYK-KSALQESSYSQYQMGYCYYIGKGIKQD 227
Query: 155 VSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLG 214
+ I ++AA+ DA +G + S + W+ K+A ++ G LG
Sbjct: 228 YQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLG 287
Query: 215 QNLLHGIGGASDFPMACYWLERASEKG 241
G G A D A YW ++A G
Sbjct: 288 CMYRDGHGTAQDLQQALYWFKKAQPTG 314
Score = 42.7 bits (99), Expect = 1e-08
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 194 STFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAW 253
S +W ++AA G E LG D +A +W E+A+++GH A G W
Sbjct: 51 SFYWLQQAAEQGHCEAQYWLGLRYKDTPTDMKDNTLALFWSEKAAQQGHRHAFNTLG--W 108
Query: 254 IDRGAHGKAIAYIWLFLSASMGYEPAKNLRDLVGGKL 290
+ G G A Y G E + NL G++
Sbjct: 109 VQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRM 145
Score = 40.8 bits (94), Expect = 6e-08
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 162 IQEAAEANFIDAILFMGGWCVSKDNIAPTPSD------STFWYEKAARMGSAEGMMRLGQ 215
+Q+AAE +A ++G KD TP+D + FW EKAA+ G LG
Sbjct: 55 LQQAAEQGHCEAQYWLG--LRYKD----TPTDMKDNTLALFWSEKAAQQGHRHAFNTLGW 108
Query: 216 NLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAW 253
G A D+ A W + +E+ H A Y+ G +
Sbjct: 109 VQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMY 146
Score = 40.4 bits (93), Expect = 7e-08
Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 13/184 (7%)
Query: 84 EALFWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLAAKFETGM 143
+A+ WY K A + A Y + R+ +A +W ++G A++
Sbjct: 122 QAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQA-ALQGHCASQERLAY 180
Query: 144 AWLYGRGVEVNVSRGI-----GLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWY 198
+ G+G N+S +QE++ + + + G + +D + +W+
Sbjct: 181 MYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDY-----QQAIYWF 235
Query: 199 EKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAWIDRGA 258
KAA G + +G G G ++ +A W +++E + Y+ G + R
Sbjct: 236 RKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMY--RDG 293
Query: 259 HGKA 262
HG A
Sbjct: 294 HGTA 297
Score = 39.7 bits (91), Expect = 1e-07
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 202 ARMGSAEGMMRLGQNLL-HGIGGASDFPMACYWLERASEKGHPEAMYHAGEAWIDRGAHG 260
A+ G++E LG+ I G+ + ++ YWL++A+E+GH EA Y G + D
Sbjct: 22 AQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTDM 81
Query: 261 K--AIAYIWLFLSASMGYEPAKN 281
K +A W +A G+ A N
Sbjct: 82 KDNTLALFWSEKAAQQGHRHAFN 104