Pairwise Alignments

Query, 385 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., Putative secreted protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 57/234 (24%), Positives = 84/234 (35%), Gaps = 24/234 (10%)

Query: 62  AESGHIPTILFLAK-----EAERNSLKEALFWYEKAAHLDNIPAMYGIVRVCQRIREDVI 116
           AE+ + P  L+L       E      ++A++W       + IP  Y    +      D  
Sbjct: 201 AENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLN-----EGIPGSYTPGHIPLNALYDKA 255

Query: 117 AKEKAKFWQTCVRGVEGDLAAKFETGMAWLYGRGVEVNVSRGIGL-------IQEAAEAN 169
                   QT  R     + AK +      Y  G  +     + L        Q  AEA 
Sbjct: 256 HPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQ 315

Query: 170 FIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPM 229
               ++FM G  VS+D        +  WY KAAR G       LG     G G A     
Sbjct: 316 DAIGVMFMQGEGVSQDY-----QQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQ 370

Query: 230 ACYWLERASEKGHPEAMYHAGEAW-IDRGA-HGKAIAYIWLFLSASMGYEPAKN 281
           A  W  +A+++   +A Y  G A+   RG       A  W   +A  G+ PA++
Sbjct: 371 AIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGFTPAQS 424



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 12/157 (7%)

Query: 132 EGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTP 191
           +G   A+   G+ ++ G GV  +  + +   ++AA      A   +G        +A + 
Sbjct: 309 QGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSD 368

Query: 192 SDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGE 251
             +  WY KAA+   A+   +LG     G G   +   A  W  +A+E+G   A    GE
Sbjct: 369 RQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGFTPAQSALGE 428

Query: 252 AWIDRGAHGK-------AIAYIWLFLSASMGYEPAKN 281
            +    AHG+         AYIW ++ ASM  E +K+
Sbjct: 429 IY----AHGRQGVPKDNKQAYIWYYM-ASMYTEKSKD 460



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 25/107 (23%), Positives = 48/107 (44%)

Query: 132 EGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTP 191
           +GD +A+F  G  +  GR V+ +    I  +++A +     +   +G      +N   + 
Sbjct: 48  QGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSR 107

Query: 192 SDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERAS 238
             +  WY KAA +G +     LG   ++G G   +  +A  W  +A+
Sbjct: 108 QKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154



 Score = 40.0 bits (92), Expect = 1e-07
 Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 16/214 (7%)

Query: 81  SLKEALFWYEKAAHLDNIPA--------MYG--IVRVCQRIREDVIAKEKAKFWQTCVRG 130
           S ++AL WY KAA L +           MYG    +  Q   E              VRG
Sbjct: 106 SRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRG 165

Query: 131 VEGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPT 190
                +A+F+ G+ + +G+GV  +  +   L+++AAE  +  A L++G      + +   
Sbjct: 166 QGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQD 225

Query: 191 PSDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAG 250
              + +W  +        G + L  N L+     +D   +  W  + +++   +  Y+ G
Sbjct: 226 YRQAVYWLNEGIPGSYTPGHIPL--NALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFG 283

Query: 251 EAWIDRGAH---GKAIAYIWLFLSASMGYEPAKN 281
             W   G H      +A  W   +A+ G   A++
Sbjct: 284 -VWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQD 316



 Score = 34.3 bits (77), Expect = 8e-06
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 2/114 (1%)

Query: 162 IQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGI 221
           +++ AE     A   +G W      + P    +  W EKA + GS      LG +  +G 
Sbjct: 42  LEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGE 101

Query: 222 GGASDFPMACYWLERASEKGHPEAMYHAGEAWI--DRGAHGKAIAYIWLFLSAS 273
                   A  W  +A+E G        G+A++  D       +A  W   +AS
Sbjct: 102 NFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAAS 155