Pairwise Alignments

Query, 385 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., SEL1-like repeat protein from Dickeya dianthicola ME23

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 48/156 (30%), Positives = 66/156 (42%), Gaps = 16/156 (10%)

Query: 133 GDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPS 192
           G+  A+++    +  G+GV             AA+     A L+M      KD +     
Sbjct: 182 GNRDAQYQLAQRYEQGKGVAKRTDLAERWYFRAAQRGQPQAQLWMARHADDKDALG---- 237

Query: 193 DSTFWYEKAARMGSAEGMMRLGQNLLHGIGG-ASDFPMACYWLERASEKGHPEAMYHAGE 251
               WY++AA  G A   + L Q    G  G A D   A YWLERAS KG+ EA Y    
Sbjct: 238 ----WYQQAAANGEAGAQLWLAQAYRDGNKGPAKDDKQAHYWLERASGKGNGEADYTLSR 293

Query: 252 AWIDRGAHGKAIAYIWLFLSASMGYEPAKNLRDLVG 287
              D           +L L++S GY PA+  R+L G
Sbjct: 294 MQADNAKREH-----YLVLASSAGYVPAQ--RELGG 322



 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 26/240 (10%)

Query: 62  AESGHIPTILFLAKE-AERNSLKEALFWYEKAAHLDNI--PAMYGIVRVCQ-------RI 111
           AE G+      LAK+ A R+   EA+ W +KAA L ++  P     +   Q        +
Sbjct: 35  AERGNGEAQYRLAKQLASRSHYGEAMQWMQKAADLSDLSGPRESRALAALQVGDWYQAGL 94

Query: 112 REDVIAKEKAKFWQTCVRGVEGDLAAKFETGMAWLYGRGVEVNVSRGIGLIQEAAEANFI 171
            E        ++WQ   R   G+   +  T     +   +   V+  +   + AA+  + 
Sbjct: 95  GEPKNTPLARQWWQKASRLGSGEAGYRLGTDCQAQHQGKL---VAACLDAFERAADNQYA 151

Query: 172 DAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLGQNLLHGIGGASDFPMAC 231
            A L +  W  +      T   +T W EKAA  G+ +   +L Q    G G A    +A 
Sbjct: 152 PAQLVVAQWYAAHPG---TEEQATGWVEKAADRGNRDAQYQLAQRYEQGKGVAKRTDLAE 208

Query: 232 YWLERASEKGHPEAMY----HAGE----AWIDR-GAHGKAIAYIWLFLSASMGYE-PAKN 281
            W  RA+++G P+A      HA +     W  +  A+G+A A +WL  +   G + PAK+
Sbjct: 209 RWYFRAAQRGQPQAQLWMARHADDKDALGWYQQAAANGEAGAQLWLAQAYRDGNKGPAKD 268



 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 18/285 (6%)

Query: 21  WMIVLSVRRKRLEEERRAREEAYRKALERNREQERKERLFKAESGHIPTILFLAKEAERN 80
           W+   + R  R  + + A+     K + +  +   +     A+ G     L++A+ A+  
Sbjct: 174 WVEKAADRGNRDAQYQLAQRYEQGKGVAKRTDLAERWYFRAAQRGQPQAQLWMARHADD- 232

Query: 81  SLKEALFWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEK-AKFWQTCVRGVEGDLAAKF 139
             K+AL WY++AA      A   + +  +   +     +K A +W     G +G+  A +
Sbjct: 233 --KDALGWYQQAAANGEAGAQLWLAQAYRDGNKGPAKDDKQAHYWLERASG-KGNGEADY 289

Query: 140 ETGMAWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYE 199
                    R    N  R   L+  A+ A ++ A   +GGW + +  +          + 
Sbjct: 290 TLS------RMQADNAKREHYLVL-ASSAGYVPAQRELGGWLLKRGELERAREV----FA 338

Query: 200 KAARMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAWID--RG 257
            AA  G  E  +  G+ L  G GG +D+  A      A+  G+  A Y  G    D    
Sbjct: 339 SAAATGDTESRLAYGEMLRLGQGGKADYVEAMKQYRFAAHDGNRMAQYRMGMMRQDGLGA 398

Query: 258 AHGKAIAYIWLFLSASMGYEPAKNLRDLVGGKLGVESIVGLQALA 302
           +  +  AY W  L+A+ G   A   R+ +   +  + I   Q L+
Sbjct: 399 SRNRIHAYAWYSLAATEGMAEAIAARNDLEATMQPDEIKAGQKLS 443



 Score = 24.6 bits (52), Expect = 0.006
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 10/54 (18%)

Query: 234 LERASEKGHPEAMYHAGEAWIDRGAHGKAIAYIWLFLSASMGYEPAKNLRDLVG 287
           L +++E+G+ EA Y   +    R  +G+A+ ++          + A +L DL G
Sbjct: 31  LRKSAERGNGEAQYRLAKQLASRSHYGEAMQWM----------QKAADLSDLSG 74