Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., HTH-type transcriptional regulator HdfR from Escherichia coli ECRC62

 Score =  158 bits (400), Expect = 1e-43
 Identities = 96/278 (34%), Positives = 150/278 (53%), Gaps = 9/278 (3%)

Query: 13  MDVKVFRTFLELAKVRHFGRAAENLYLTQAAVSARIKQLENHFDAQLFTRDRNNIKLTSA 72
           +D ++ +TFLE+++ RHFGRAAE+LYLTQ+AVS RI+QLEN     LFTR RNNI+LT+A
Sbjct: 1   VDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAA 60

Query: 73  GERLVGYAEVMVATLQQAKFELSLESGKALQLTLGGTPNIWDAYLQHCLSRI---TDTFE 129
           GE+L+ YAE +++T Q A+ E++  + +  + ++G + ++W+  L   L R+    D   
Sbjct: 61  GEKLLPYAETLMSTWQAARKEVA-HTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHT 119

Query: 130 GYGFLAEVMGREQLNRGLLERTLDMAFALDPIKAEELQCKKVADLVLVLVSTKPDDADSV 189
           G  F A +  R+ L + L ER LD+    +  K +E   + +    L L ++ P      
Sbjct: 120 GLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKG- 178

Query: 190 FENRYVYVDWGARFASEHADRHPKAPAPFLRTSTARIALDFILEKGGSAYLPQTMVQPLL 249
            +  Y+ ++WG  F    A        P L TS+A +A   I    G  +LP +  +   
Sbjct: 179 -DLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWAR--- 234

Query: 250 DAGQLHRVSEVNDWQRPLYLSYRKNSSSIEAIVQVEKL 287
             G LH V +     RPLY  + +NS     I  + K+
Sbjct: 235 KKGGLHTVVDSTTLSRPLYAIWLQNSDKNTLIRDLLKI 272