Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., HTH-type transcriptional regulator HdfR from Dickeya dianthicola ME23

 Score =  169 bits (427), Expect = 9e-47
 Identities = 107/274 (39%), Positives = 152/274 (55%), Gaps = 7/274 (2%)

Query: 13  MDVKVFRTFLELAKVRHFGRAAENLYLTQAAVSARIKQLENHFDAQLFTRDRNNIKLTSA 72
           MD  + +TFLE+++ RHFGRAAE+LYLTQ+AVS RI+QLEN   A LFTR RNNI+LT A
Sbjct: 1   MDTDLLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGANLFTRHRNNIRLTPA 60

Query: 73  GERLVGYAEVMVATLQQAKFELSLESGKALQLTLGGTPNIWDAYLQHCLSRITDTFEGYG 132
           GERL+ YAE ++ T Q AK E++  S +  QL++G T ++W+A+L   L+ +        
Sbjct: 61  GERLLPYAENLIGTWQIAKKEVA-RSQQHSQLSIGATASLWEAFLTPWLNELYQQRPLLQ 119

Query: 133 FLAEVMGREQLNRGLLERTLDMAFALDPIKAEELQCKKVADLVLVLVSTKPDDADSVFEN 192
             A +  R+ L + L ER LD+    +  K +EL C+ + +  L L +T   D  S  E 
Sbjct: 120 LEARIAQRQTLIKQLHERQLDLLITTESPKMDELSCQLLGNFSLSLFTT---DNVSAEER 176

Query: 193 RYVYVDWGARFASEHADRHPKAPAPFLRTSTARIALDFILEKGGSAYLPQTMVQPLLDAG 252
            Y+ ++WGA F        P    P L TS+A +    +   GG A+LP           
Sbjct: 177 PYIRLEWGADFHQYENHWLPGDQVPSLTTSSAHLTRQLMSTIGGCAFLPSDWSPRY---P 233

Query: 253 QLHRVSEVNDWQRPLYLSYRKNSSSIEAIVQVEK 286
           +L+ + E N   RP Y  +  NS   E I Q+ K
Sbjct: 234 ELYPIPEANIVVRPCYAVWLGNSDQQELIKQLLK 267