Pairwise Alignments

Query, 452 a.a., 3-methyladenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) / DNA-3-methyladenine glycosylase II (EC 3.2.2.21) from Variovorax sp. SCN45

 Score =  251 bits (641), Expect = 4e-71
 Identities = 177/502 (35%), Positives = 263/502 (52%), Gaps = 66/502 (13%)

Query: 7   LSAEVCQRARMSRDPRFDGRFFVAVKTTGIFCRPICPANLPKEENVEYFSSQALAVSAGY 66
           L ++ C  A  + D RFDG FF AV +TGI+CRP+C   LP+ EN  +F   A A +AG+
Sbjct: 11  LESDACYLAMKTHDARFDGSFFTAVTSTGIYCRPVCRVKLPRRENCRFFRHAAQAEAAGF 70

Query: 67  RPCLRCRPESAPHSWAWKGAETT---FLRALTLIEQGEL---DG-SLETLASRLGISDRY 119
           RPCLRCRPE AP + +W   + +    L+A  LI++ +    DG     +A+RLG+SDR+
Sbjct: 71  RPCLRCRPELAPRAASWSTEDASRILALQAARLIDEPDAWSEDGPGAAQIAARLGVSDRH 130

Query: 120 LRQLFQRHLGMPPKQYAQIQQLMFAKQLLHTSQISITEVAYASGFQSTRRFNDAFQKLFR 179
           LR++F+   G+ P QY Q ++L+ AKQL+  +++ +T+VA ASGF S RRFN AF + + 
Sbjct: 131 LRRIFEAQFGVSPLQYLQTRRLLAAKQLIADTRLPMTQVALASGFASVRRFNAAFVEHYG 190

Query: 180 LTPTQVRR---------ERAALPSRNHLSLAFRGPFDWAHMLDFYRLRAIEGMELIDEQS 230
           L P+ +RR         E  A+  R    L FR P+D   ML F+  RA+ G+E++   +
Sbjct: 191 LNPSALRRAGGEAVEGGESRAIEVR----LGFRPPYDDNAMLGFFARRALRGIEVV-ATA 245

Query: 231 YQRHFVLGEGTGWFKASMA-------QSH---LDIEFEMER------LSD-----LRHLV 269
             +    G    + K +         Q+H   L + F++ER      +SD     L  ++
Sbjct: 246 DGKEPAKGSTAAYVKLARTLRIQQGNQAHAGWLQLRFDLEREQVLLSVSDSLAAVLPIVI 305

Query: 270 ARLRRMFDLDADLISIEAHLEQLAPGLVRRTGIRIPGVWNAWEAGVRAVLGQQVSVKAAI 329
           +R R +FDLDA+ ++I   L    P      G+R+PG  + +E  VRAVLGQQ++V AA 
Sbjct: 306 SRARALFDLDAEPMAINTALHAAFP---HGDGLRVPGAVDGFELAVRAVLGQQITVAAAR 362

Query: 330 GQLNLLVSTLAAS-----EGSTRYFPTPEQVQMSD---LSFLRMPERRKETLKRLADYV- 380
              + LV+    +     EG  R FPTP  +  +    L  L +  +R+  L+ +A  V 
Sbjct: 363 TLGSRLVAAFGETIATPIEGLDRLFPTPAAIAQASGDALGQLGIVRQRQAALQAIAREVA 422

Query: 381 ----RLHP-MDSP---MAWLSLSGIGPWTVDYAQLRGESRSHCFLTGDLIVKKAL----A 428
                LH   D P    A   L GIG WT  Y  +R       F  GD+ ++KAL    A
Sbjct: 423 EGRLALHAGADVPSTIAALQELPGIGAWTAQYIAMRALRWPDAFPAGDVALQKALGVTTA 482

Query: 429 KFPQLTAESVAPWGSYATFHCW 450
           +     +++  PW SYA    W
Sbjct: 483 RAASEASQAWRPWRSYAVLRAW 504