Pairwise Alignments

Query, 298 a.a., EamA family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., permease from Pseudomonas simiae WCS417

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 64/276 (23%), Positives = 135/276 (48%), Gaps = 12/276 (4%)

Query: 8   LQGALWMLTAGLAFAIVNSVAQYASIQFGLPSTTVALVQYAIAIVVILPYLKTLGIRQSL 67
           LQG      A L  A+ ++V ++    + +   T+   +  + ++V L   +   +R++ 
Sbjct: 7   LQGIALCSLAYLFLALQDAVVKWLVADYSV--FTILFWRSLVVVIVCLVAGRMGLLRRAW 64

Query: 68  RTQQFGWHLLRVFLAVIGIQLWLWALAYPVPIWQGIALLMTSPLFATIGSGLWLREKVGM 127
            +      ++R  L+++   L+  A A  + + +   L  ++P+  T+ + L L+E+   
Sbjct: 65  VSVSRRMLIIRGLLSLLAWLLYYTA-AKDLSLAEMTTLYFSAPIMVTLLAALILKERASR 123

Query: 128 ARWVATLTGFIGAMIILEP--WADDFNLASLLPVGAAFFWASYSLMVKKLSSHDSPSTMV 185
            +W+A + GF+G +I   P    D + +A  L +GAA  WA   + ++++   D  ST++
Sbjct: 124 GQWIALIIGFVGVIIACRPTHMLDPWPIA--LTLGAALCWAFTYIQLRQV---DPSSTVL 178

Query: 186 VYLLLLITPFNLLLA--LPDWQMPNGQTVWLLLIGAGVMTALAQWAIAKAYAVADASFVQ 243
             +L+    F + +   LP    P     WL ++ AG++  + Q+ +  ++  A A+ + 
Sbjct: 179 EQMLITNVVFVVCMGVTLPWTHTPAPAPAWLGMLAAGLVGGIGQFLLFASFRRATATLLA 238

Query: 244 PFDHAKLPLNVLAGWLVFGWVPPGRLWLGAAIIVLS 279
           PF++  L    +   LV+G +  G L +GA +I +S
Sbjct: 239 PFEYTGLIWAFILSSLVWGTLMDGSLIIGAVLIAIS 274