Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., outer membrane phosphoporin protein E (NCBI) from Escherichia coli BW25113

 Score = 89.7 bits (221), Expect = 9e-23
 Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           MKK+ +A+ V+  V S S  AA +Y+ +G  L V G+++     + N   +       ++
Sbjct: 1   MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNASKDG------DQ 54

Query: 61  SRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETT-FKQRYMYVGMK-GDFGS 118
           S +R    GET I   + G+G WEAE      AG   E +T   K R  + G+K  D GS
Sbjct: 55  SYIRFGFKGETQINDQLTGYGRWEAE-----FAGNKAESDTAQQKTRLAFAGLKYKDLGS 109

Query: 119 LSFGRQNTAGVQISDMSDI-GTFTGDQKAFV-------SAGNEQINNTIAYGYDFESFKL 170
             +GR   A   +   +D+   F GD  A         ++G     NT  +G   +   L
Sbjct: 110 FDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGV-IDGLNL 168

Query: 171 KASYIADDQ------KNADGYGLSGIYSAPFG---LDIGLGYAAND---------LGTDK 212
              Y   ++      +N DG+G S  Y   FG     I   Y  +D          GT K
Sbjct: 169 TLQYQGKNENRDVKKQNGDGFGTSLTYD--FGGSDFAISGAYTNSDRTNEQNLQSRGTGK 226

Query: 213 GSADQIIAGLGYTMGDLYFGATYTTGDKDDKADTEFT----GIEVSAQYKITKEFRLIAA 268
             A+    GL Y   ++Y    Y+   K       F       E  AQY+     R    
Sbjct: 227 -RAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLG 285

Query: 269 Y-QNQEEETKNV-TKDKADFFELTGRYDFTKNFRSYLAYKANGLD-DKDAGYKVEDTIRL 325
           Y  ++ ++ + +  +D  ++ ++   Y F KN  +++ YK N LD D       +D + +
Sbjct: 286 YVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAV 345

Query: 326 GLRYDF 331
           G+ Y F
Sbjct: 346 GMTYQF 351