Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., phosphoporin PhoE from Escherichia coli ECOR38

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 53/372 (14%)

Query: 1   MKKAAIAVAVLSAVV--SGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTML 58
           MKK  +A++ ++A V  + S  AA +Y+ +   L + G++  +  F+ ND  +       
Sbjct: 1   MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDG------ 54

Query: 59  NKSRVRLNVAGETDIGAGMKGFGFWEAE-QGVKSSAGTSTEQETTFKQRYMYVGMK-GDF 116
           + +  RL   GET I   + GFG WE + +G ++ +  S++ +T    R  + G+K GD+
Sbjct: 55  DTTYARLGFKGETQINDQLTGFGQWEYDFKGNRAESQGSSKDKT----RLAFAGLKFGDY 110

Query: 117 GSLSFGRQNTAGVQISDMSDI-GTFTGDQ----KAFVS---AGNEQINNTIAYGYDFESF 168
           GS+ +GR       I   +D+   F GD       F++    G     N   +G   +  
Sbjct: 111 GSIDYGRNFGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGL-VDGL 169

Query: 169 KLKASYIADDQK------NADGYGLSGIYSAPFGLDIGLGYAAND------------LGT 210
              A Y   + +      N DG+G S  Y    G  +G  YA +D               
Sbjct: 170 NFAAQYQGKNDRTDVAEANGDGFGFSTTYEYE-GFGVGATYAKSDRTDGQVAYGKSKFNA 228

Query: 211 DKGSADQIIAGLGYTMGDLYFGATYT-----TGDKDDKADTEFTGIEVSAQYKITKEFRL 265
              +A+   AGL Y   ++Y   TY+     T   ++    +    E  AQY+     R 
Sbjct: 229 SGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRP 288

Query: 266 IAAYQNQEEETKNV--TKDKADFFELTGRYDFTKNFRSYLAYKANGLDD----KDAGYKV 319
             AY   + +   V   +D   + ++   Y F KN  +++ YK N +DD    K AG   
Sbjct: 289 SVAYLQSKGKDLGVHGDRDLVKYVDVGATYYFNKNMSTFVDYKINLIDDSKFTKTAGIDT 348

Query: 320 EDTIRLGLRYDF 331
           +D + +GL Y F
Sbjct: 349 DDIVAVGLVYQF 360