Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., porin from Dickeya dianthicola ME23

 Score = 97.1 bits (240), Expect = 6e-25
 Identities = 95/382 (24%), Positives = 157/382 (41%), Gaps = 57/382 (14%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           MK+  +AV + + + +G+  AA VY+ +G  L + G++E    F GN+ G        ++
Sbjct: 1   MKRNVLAVVIPALLAAGAANAAEVYNKDGNKLDLTGKIEAAHYF-GNESGNSSYFGDGDQ 59

Query: 61  SRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTST--EQETTFKQRYMYVGMK-GDFG 117
           +  RL   GET I   + G+  +E +    ++  +++     T  K RY Y G+K GDFG
Sbjct: 60  TFTRLGFKGETKINNDLTGYARFEYQFDASNAEDSNSLPNSNTGSKTRYAYAGLKFGDFG 119

Query: 118 SLSFGRQNTAGVQISDMSDIGTFTGDQKAFV------SAGNEQINNT----IAYGYDFES 167
           SL +GR    G      +D+    G   ++       +AG     N     +  G+DF +
Sbjct: 120 SLDYGRNRAVGYDGISYTDVLPEQGGDSSYTDNLTGRNAGVATYRNKNFFGLVDGWDF-A 178

Query: 168 FKLKASYIADDQ---KNADGYGLSGIYSAPFGLDIGLGYAANDLGTDKGS---------- 214
              +A +    Q   +  DG+ +S  Y++P G+ +   Y   D  T   S          
Sbjct: 179 LGYQAKHEDSSQLRKQTGDGWAISSSYTSPIGVGVIASYTGADRTTTDSSGSGAARQTAD 238

Query: 215 -----ADQIIAGLGYTMGDLYFGATY-------TTGDKDDKADTEFTGIEVSAQYKITKE 262
                A+    GL Y   ++Y  ATY        TG +   A  +    E  AQY +   
Sbjct: 239 GRGAKAEAWATGLKYDANNVYVAATYGEFHNLTYTGSRATNALDKTKVFEAVAQYTLDFG 298

Query: 263 FRLIAAYQNQEEETKN-----------VTKDKADFFELTGRYDFTKNFRSYLAYKANGLD 311
                 Y + + E              VTK    +  L   Y F KNF +++ Y  N +D
Sbjct: 299 LTPSIGYVSSKAEDNGAGGLSSKTNGYVTK----YVSLGSTYAFNKNFSTFVEYDINLID 354

Query: 312 DKDAGY--KVEDTIRLGLRYDF 331
           + +  Y     +T+ +G  Y F
Sbjct: 355 NDNNPYNRSTGNTVAVGAIYQF 376