Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., porin from Dickeya dadantii 3937

 Score = 86.7 bits (213), Expect = 8e-22
 Identities = 97/379 (25%), Positives = 151/379 (39%), Gaps = 60/379 (15%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           MK+  +AV + + + +G+  AA VY+ +G  L + G+++    F+ ++      G   +K
Sbjct: 1   MKRNILAVVIPALLAAGAANAAEVYNKDGNKLDLNGKIDGLHYFSKDN------GNSGDK 54

Query: 61  SRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMK-GDFGSL 119
           +  RL   GET I + + G+G  E +    ++  T+       K RY Y G+K  +FGSL
Sbjct: 55  TYARLGFLGETKINSDLTGYGRLEYQFNAANAEDTN---GANGKTRYAYAGLKFANFGSL 111

Query: 120 SFGRQNTAGVQISDMSDIGTFTGDQKAFV------SAGNEQINNTIAYG-YDFESFKLKA 172
            +GR           +D+    G   A+       S+G     N   +G  D  +F L  
Sbjct: 112 DYGRNRNVSYDGISYTDVLPEWGGDSAYTNSFTGRSSGVANYRNKNFFGLVDGLNFGLSY 171

Query: 173 SYIADDQKN-----ADGYGLSGIYSAPFGLDIGLGYA-ANDLGTDKGS----------AD 216
                D  N       GY LS  Y++P G+ I   Y   N      GS          A+
Sbjct: 172 QSAHTDSTNVRNNLGAGYALSTSYTSPMGVGITGSYGHVNRANKANGSSVIDDGRGTDAE 231

Query: 217 QIIAGLGYTMGDLYFGATY--------------TTGD--KDDKADTEFTGIEVSAQYKIT 260
               GL Y    +Y  ATY               TG       A  +    E  AQY   
Sbjct: 232 MWATGLKYDANSIYVAATYGEYRNLSYVGFSSFNTGSTRAGGTAFDKTQVFEAVAQYAFD 291

Query: 261 KEFRLIAAYQNQEEETKNVTKDKADF------FELTGRYDFTKNFRSYLAYKANGLDDKD 314
              +   AY + + +       + D+      + LT  Y F KNF +Y  Y  N L   +
Sbjct: 292 FGLKPSIAYVSAKAKDDTAATTQNDYIVKYVSYALT--YSFNKNFSTYTEYDMNLLSSSN 349

Query: 315 AGYKV--EDTIRLGLRYDF 331
           A YK+  +D + +G+ Y F
Sbjct: 350 A-YKMATDDRVAVGMVYQF 367