Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., porin from Dickeya dadantii 3937

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 94/379 (24%), Positives = 156/379 (41%), Gaps = 61/379 (16%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           MK+  +AV + + + +G+  AA VY+ +G  L + G++     F+ +D  +       ++
Sbjct: 1   MKRNLLAVVIPALLAAGAANAAEVYNKDGNKLDLNGKVVGLHYFSKDDNNKG------DQ 54

Query: 61  SRVRLNVAGETDIGAGMKGFGFWE----AEQGVKSSAGTSTEQETTFKQRYMYVGMK-GD 115
           S VRL   GET I   + G+G +E    A Q   ++ G +       K RY Y G+K  D
Sbjct: 55  SYVRLGFKGETQITKDLTGYGRFEHNFNASQAEDTNGGANAS-----KTRYAYAGLKFSD 109

Query: 116 FGSLSFGRQNTAGVQISDMSDIGTFTGDQKAFVSAGNEQINNTIAY----------GYDF 165
           FGS+ +GR  +        +D+    G  +A+      + +    Y          G+DF
Sbjct: 110 FGSIDYGRNRSVAYDGISYTDVLPEFGGDQAYTDNLTSRNSGVATYRNKNFFGLVDGWDF 169

Query: 166 ----ESFKLKASYIADDQKNADGYGLSGIYSAPFGLDIGLGY-----AANDLGTDKG-SA 215
               +S    +S I   ++   G+ +S  Y+APFG+ +   Y     +   +   +G  A
Sbjct: 170 ALGYQSAHSDSSRI--QKQTGAGWAISSSYTAPFGVGVVGSYTQANRSETQIADGRGDKA 227

Query: 216 DQIIAGLGYTMGDLYFGATY------TTGDKDDKADTEFTGIEVSAQYKITKEFRLIAAY 269
           +    GL Y   ++Y  ATY      T       ++   + I  +  +  TK F  +A Y
Sbjct: 228 EAWATGLKYDANNVYVAATYGEYHNLTYIANSTFSNNTSSAIRGNNAFDKTKIFEAVAQY 287

Query: 270 Q--------------NQEEETKNVTKDK--ADFFELTGRYDFTKNFRSYLAYKANGLDDK 313
                            E+ T     D     +  L   Y F KNF +Y  Y  N LD  
Sbjct: 288 NFDFGLTPSIGYVTAKGEDNTSAARTDDYITKYVSLGMTYSFNKNFSTYTEYDINLLDSN 347

Query: 314 DA-GYKVEDTIRLGLRYDF 331
           +A G    D + +G+ Y F
Sbjct: 348 NAYGLSTNDIVAVGIVYQF 366