Pairwise Alignments

Query, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., Inner membrane protein YgaZ from Xanthobacter sp. DMC5

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 12/194 (6%)

Query: 20  QGTIAMLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLYAGAAQLVAIGMFK---TG 76
           +G  AMLPL   +  +G+  G+ +I+   +++E+   SA+++AG AQ+VA+  +    T 
Sbjct: 16  EGARAMLPLMPGIAAFGMAFGAASIQKSFTLLEATVSSAIVFAGLAQMVALEGWTQHWTA 75

Query: 77  AGLLSLLIATFFITSRHFLYSVSMRSKISPLPLRWRL--TLGFLLTDELFAICGAQSDKQ 134
             LL+L   T  +  RH L   S+R  +  LP  W+    L  +  +   A    +++  
Sbjct: 76  GSLLALGFLTLTVNMRHVLMGASLRPWLGTLPA-WKSYPALMMMADNNWAAALRYRAEGG 134

Query: 135 FNRWYALGAGLSFYLIWNLASLVGIVAGSYLPDLNQWGLEFAVAATFIAIVIPNIK---- 190
            +  Y +G+GL  + +W LA+ VG + G  +PD    G++  V A FIA+++PN K    
Sbjct: 135 NDVGYFVGSGLITWFVWVLATAVGHLVGGGIPDPKAVGIDLVVPAFFIAMLLPNWKGKRE 194

Query: 191 --SWPVLISVLTAL 202
              W V  +V TA+
Sbjct: 195 AVGWGVAAAVSTAV 208