Pairwise Alignments

Query, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., no description from Variovorax sp. SCN45

 Score = 70.5 bits (171), Expect = 3e-17
 Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 19/235 (8%)

Query: 19  WQGTIA-----MLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLYAGAAQLVAIGMF 73
           W+G  A     +   ++  +  GL+AG    ++G+ +    A+S +++A A+QL  + + 
Sbjct: 6   WRGAFAEGRRDIAGAALGTMAMGLVAGVAMAKSGVGLGAILAMSLLVFASASQLACLPLI 65

Query: 74  KTGAGLLSLLIATFFITSRHFLYSVSMRSKISPLPLRWRLTLGFLLTDELFAI------- 126
             GA L  ++     +  R  ++SVS R          R+ L +L  D ++A        
Sbjct: 66  AAGAPLWVIVATACVLNLRFVVFSVSWRRYFGGHRRTQRVLLSYLAGDPVYAQFVLRHPE 125

Query: 127 ---CGAQSDKQFNRWYALGAGLSFYLIWNLASLVGIVAGSYLPDLNQWGLEFAVAATFIA 183
               G  + +Q  + Y LG  L+ +  W++ASL GI     +P    WGL F      +A
Sbjct: 126 PAPSGCATTRQ--QGYFLGLALTNWAAWHVASLAGIFLADAIP--AAWGLRFIGVLALLA 181

Query: 184 IVIPNIKSWPVLISVLTALVLSVLLTVMGIEGSLMFASIGAMLAGYGTERLLGAR 238
           + +P +    V  S L A ++++      +  +++ A   A  AG   +R  GAR
Sbjct: 182 LALPMLTDRAVRCSALAAGMVALATASWPMGLNVVAAIATAFAAGTWADRRWGAR 236