Pairwise Alignments

Query, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., Branched-chain amino acid transport protein azlC from Variovorax sp. SCN45

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 12/231 (5%)

Query: 18  FWQGTIAMLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLYAGAAQLVAIGMFKTGA 77
           F  G   M  +++ +  WGL+ G   +++ +SVIE+ A++ ++YAG++QL AI +   GA
Sbjct: 13  FRAGVRDMSSVALGIGAWGLMTGVAMVKSDMSVIEAVAMTLLVYAGSSQLAAIPLLAAGA 72

Query: 78  GLLSLLIATFFITSRHFLYSVSMRSKISPLPLRWRLTL-GFLLTDELFAICGAQ------ 130
               +L   F +  R  ++S+ +R  +  +P RWR  L G+L  D  +A+   +      
Sbjct: 73  PAWVILATGFCVNLRFVVFSLHLRPYLMHMP-RWRRMLHGYLTADMSYALFTKKYQKPPL 131

Query: 131 --SDKQFNRWYALGAGLSFYLIWNLASLVGIVAGSYLPDLNQWGLEFAVAATFIAIVIPN 188
             +++Q    Y  G     +  W   S++G+   +++P    WGL FA   + +AIV   
Sbjct: 132 TIAEQQSQEAYLTGNYFVTWCAWMGMSMLGVALANFIP--QSWGLGFAGVLSLVAIVCSM 189

Query: 189 IKSWPVLISVLTALVLSVLLTVMGIEGSLMFASIGAMLAGYGTERLLGARP 239
             +   +++ L A   +V    + ++ +++ A   A+L  +  E+  G  P
Sbjct: 190 ATTRLRVLAALIAGATAVAAYALPLKLNIVVAIGVAVLLCFWLEKQFGLDP 240