Pairwise Alignments

Query, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., AzlC family ABC transporter permease from Serratia liquefaciens MT49

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 19/226 (8%)

Query: 12  PTPTRLFWQGTIAMLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLYAGAAQLVAIG 71
           P  +  F  G +  LP+ I  +P     G  A++ G S +ES   S ++YAGA+Q V   
Sbjct: 4   PAVSSTFTHGIVDSLPIVIGYVPVAFAFGLSAVKLGFSPLESIFFSCIIYAGASQFVITA 63

Query: 72  MFKTGAGLLSLLIATFFITSRHFLYSVSMRSKISPLPLRWRLTL-GFLLTDELFAICGAQ 130
           +   G  L    +    +  RH LY  ++R +I       +  L  F LTDE+FA   A+
Sbjct: 64  LLSAGMSLWVSALTVMAMDIRHLLYGPALRHRIVSRMSGGKTALWAFGLTDEVFAAATAK 123

Query: 131 SDKQFNRW---YALGAGLSFYLIWNLASLVGIVAGSYLPDLNQW-----GLEFAVAATFI 182
             +    W   + +G  L  +L W   + +G V G+    L Q+      L F + A F+
Sbjct: 124 LMRNNRSWSENWMIGISLCSWLSWVAGTALGAVFGN--GPLEQFPVIEASLSFMLPALFL 181

Query: 183 AIVIPNIKSWPVLISVLTALVLSVLLTVMGIEGSLMFASIGAMLAG 228
           + ++   K  P  +++  AL  ++L       G ++F+   A+LAG
Sbjct: 182 SFLLAAFKR-PQSLTIAAALAGALL-------GVVLFSIPVAILAG 219