Pairwise Alignments

Query, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Inner membrane protein YgaZ from Acinetobacter radioresistens SK82

 Score = 72.8 bits (177), Expect = 6e-18
 Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 7/218 (3%)

Query: 18  FWQGTIAMLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLYAGAAQLVAIGMFKTGA 77
           FWQG      + +  LP     G  A + G +  E+  LS  +YAGA+Q + + +  +G 
Sbjct: 14  FWQGARDSQAIMLTYLPVSFAFGVSATQFGFTAWEALFLSCSMYAGASQFLVVALLGSGT 73

Query: 78  GLLSLLIATFFITSRHFLYSVSMRSKIS-PLPLRWRLTLGFLLTDELFA---ICGAQSDK 133
            +    +    +  RH LY  ++ + I+  L L+      + LTDE+FA   I  +Q  +
Sbjct: 74  SIWMTALTVIALDIRHLLYGPALYNLINHQLNLKKTAAWAWGLTDEVFASGMIKLSQRRQ 133

Query: 134 QFNRWYALGAGLSFYLIWNLASLVGIVAG---SYLPDLNQWGLEFAVAATFIAIVIPNIK 190
           +++  + LG  L  +L W   S +G +     S LP   Q  L+F + A F++ ++   +
Sbjct: 134 EWSESWMLGLSLFSWLSWAGGSFLGGMFANQVSNLPRFLQAALDFLLPALFLSFLLAAFE 193

Query: 191 SWPVLISVLTALVLSVLLTVMGIEGSLMFASIGAMLAG 228
               L+  +  +V ++    + +  ++    I  +LAG
Sbjct: 194 RKHTLVVAVCLIVSALACYFINLSAAIFIGIIAGILAG 231