Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 7e-29
 Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 9/260 (3%)

Query: 18  AEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSF-YRTGGNHIAPQDSIILVNAD 76
           A    GL+ ++A +    F  H H+ Y +G    G QSF YR    H  P  +++L + D
Sbjct: 14  APHASGLDRIEAYFAGFAFDPHRHDTYAIGRTLMGVQSFHYRGDMVHSLPGTTMVL-HPD 72

Query: 77  EVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFE 136
           E H GH+  + G+ Y+ +Y  P    ++ ++I      P+ P  +  DP L     ++ +
Sbjct: 73  ETHDGHAGSDEGFKYRMIYVEP----SLIQQILGGKPLPFIPNGLSTDPRLFRASEVLLQ 128

Query: 137 TLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSL 196
            LE   + L  +  ++     L    G    +      A       +EF+       ++L
Sbjct: 129 NLENPIDPLQEQDALFDLAHALSNVSGAIISRKTFDYVAAER---AREFIHSALGRSITL 185

Query: 197 EELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQ 256
           +E+A  AG   + L R F+  FG  P+ Y    RL L ++LL QG S+ + A   GF DQ
Sbjct: 186 DEMANHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSLVDAAMTAGFTDQ 245

Query: 257 SHLHRHFKKALGITPKQYAR 276
           SH+ R F+   G+ P ++ +
Sbjct: 246 SHMTRQFRSTYGMPPSRWVK 265