Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 21/275 (7%)

Query: 13  AKFQIAEEFG-GLE--LLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDS 69
           A+ +   E G GL   L    ++ Q++   SH   +   I  G  +F R         D 
Sbjct: 19  ARLEACAELGDGLSAALWSNHHDAQDYQAPSHHTLSC-YIGGGTGTFRRDQPGTKGGPDK 77

Query: 70  IILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDP---- 125
           + ++ A+  H     + G      +Y  PEQFA     +G  T     P+A+        
Sbjct: 78  LCILPAE--HQSAWVINGEIRLAHVYFSPEQFA-----LGCVTLLDREPRALQLRESTFL 130

Query: 126 ELASQLR----LVFETLEKSTNRLLRETLIYASLVK-LMTRHGRTAPQADQPLSALRPLL 180
           E ASQ R    L+     +   RLL  +L +  L   L+++ G       +   A     
Sbjct: 131 EDASQARRFHQLIALNWHEPAERLLTSSLAHEMLSHTLLSQVGAREGLRLKGGLAAHQRR 190

Query: 181 LVKEFLDDFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQ 240
            + E++D   +  +SL +LA +  LS +H  R F++ FGLPPH Y +  RL  A+ LL+ 
Sbjct: 191 RLAEYIDQHLEDPISLGQLAGMCALSEYHFARMFRQSFGLPPHQYLLARRLTRAQALLRS 250

Query: 241 G-VSISETAQECGFHDQSHLHRHFKKALGITPKQY 274
           G + + E A  CGF   SH    F++A+G TP +Y
Sbjct: 251 GALPLGEIALMCGFSSASHFTHRFRQAMGATPGEY 285