Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  104 bits (259), Expect = 2e-27
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 36  FSRHSHEGYTVGVIERGAQSFYRT--GGNHIAPQDSIILVNADEVHTGHSAVEGGWAYKA 93
           +  HSH  +++G ++ G   F     G  H+AP  +++LV A  VH  + A    W+Y+ 
Sbjct: 29  YKAHSHPTFSIGAVDAGRSHFTGAADGQQHLAP-GTLVLVPAHRVHACNPAPGLAWSYQM 87

Query: 94  MYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETLEKSTNRLLRETLIYA 153
           ++   +    +  E G        P  +  + E+  Q   +   L  S     ++  + A
Sbjct: 88  LHVDADWLTQLRLESGLGGIEAGEPVRICREAEVYRQFCALNRLLFSSACNGEKDAALIA 147

Query: 154 SLVKL-MTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLEELAQLAGLSPFHLVR 212
            L  L  + H   A       + L  LL   E  D    A +SLE LA+ AGL  + L+R
Sbjct: 148 FLGDLDFSAHPPLAAAPALQAATLNGLLARIEHQDP---AQLSLEVLAREAGLGRYQLIR 204

Query: 213 TFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLHRHFKKALGITPK 272
            F+   G  PHAY + AR+   + LL +G++++E A + GF DQSH  R FK  +G+TP 
Sbjct: 205 AFRAATGFTPHAYLLNARVNRGRQLLSEGLALAEVAYQLGFADQSHFQRVFKAHVGVTPG 264

Query: 273 QY 274
           QY
Sbjct: 265 QY 266